FFCP PHASE1:Hg19::chr4:87768946..87768955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:87768946..87768955,- | |||
|description=CAGE_peak_at_chr4:87768946..87768955,- | |description=CAGE_peak_at_chr4:87768946..87768955,- | ||
|id=chr4:87768946..87768955,- | |id=chr4:87768946..87768955,- | ||
|ontology_enrichment_celltype=CL:0002621!4.89e-13!3;CL:0000362!8.71e-11!8;CL:0000312!3.36e-08!5;CL:0000240!5.75e-07!6;CL:0000311!5.75e-07!6;CL:0000079!5.75e-07!6;CL:0000237!5.75e-07!6;CL:0000036!5.75e-07!6;CL:0000357!5.75e-07!6;CL:0000114!5.75e-07!6;CL:0002159!8.19e-07!13 | |ontology_enrichment_celltype=CL:0002621!4.89e-13!3;CL:0000362!8.71e-11!8;CL:0000312!3.36e-08!5;CL:0000240!5.75e-07!6;CL:0000311!5.75e-07!6;CL:0000079!5.75e-07!6;CL:0000237!5.75e-07!6;CL:0000036!5.75e-07!6;CL:0000357!5.75e-07!6;CL:0000114!5.75e-07!6;CL:0002159!8.19e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000362;7.82e-50;9!CL:0000312;2.45e-40;5!CL:0000240;7.68e-34;6!CL:0000311;7.68e-34;6!CL:0000079;7.68e-34;6!CL:0000237;7.68e-34;6!CL:0002159;1.81e-32;14!CL:0000317;8.10e-26;2!CL:1000448;8.10e-26;2!CL:0002308;8.10e-26;2!CL:0002140;8.10e-26;2!CL:0002621;8.00e-18;3!CL:0002077;4.16e-14;34!CL:0000622;3.42e-11;5!CL:0000154;1.50e-09;6!CL:0000150;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000362,7.82e-50,9;CL:0000312,2.71e-40,5;CL:0000240,8.35e-34,6;CL:0000311,8.35e-34,6;CL:0000079,8.35e-34,6;CL:0000237,8.35e-34,6;CL:0000036,8.35e-34,6;CL:0000357,8.35e-34,6;CL:0000114,8.35e-34,6;CL:0002159,1.81e-32,14;CL:0000317,7.14e-26,2;CL:1000448,7.14e-26,2;CL:0002308,7.14e-26,2;CL:0002140,7.14e-26,2;CL:0002621,8.00e-18,3;CL:0002077,5.47e-14,34;CL:0000622,3.26e-11,5;CL:0000154,1.44e-09,6;CL:0000076,5.86e-08,63;CL:0000221,6.78e-07,72;CL:0000150,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;7.68e-34;6!CL:0000114;7.68e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!4.89e-13!3;UBERON:0006122!2.59e-10!1;UBERON:0000996!2.84e-10!1;UBERON:0000997!6.91e-10!1;UBERON:0005056!6.91e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;2.22e-30;15!UBERON:0007376;2.22e-30;15!UBERON:0010371;5.84e-26;31!UBERON:0002419;8.10e-26;2!UBERON:0007771;8.10e-26;2!UBERON:0003297;8.10e-26;2!UBERON:0001821;8.10e-26;2!UBERON:0003487;8.10e-26;2!UBERON:0001820;8.10e-26;2!UBERON:0001949;8.00e-18;3!UBERON:0002097;3.36e-11;41!UBERON:0002199;2.11e-10;46!UBERON:0002416;2.11e-10;46!UBERON:0003102;4.19e-09;50!UBERON:0003929;2.03e-08;7!UBERON:0003350;1.59e-07;8!UBERON:0001828;1.59e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,2.22e-30,15;UBERON:0007376,2.22e-30,15;UBERON:0007383,2.22e-30,15;UBERON:0002419,7.14e-26,2;UBERON:0007771,7.14e-26,2;UBERON:0003297,7.14e-26,2;UBERON:0001821,7.14e-26,2;UBERON:0003487,7.14e-26,2;UBERON:0001820,7.14e-26,2;UBERON:0005089,7.14e-26,2;UBERON:0005088,7.14e-26,2;UBERON:0001949,8.00e-18,3;UBERON:0002097,9.22e-12,41;UBERON:0002199,1.39e-10,46;UBERON:0002416,1.39e-10,46;UBERON:0003102,7.68e-09,99;UBERON:0010371,2.22e-08,104;UBERON:0003350,1.59e-07,8;UBERON:0001828,1.59e-07,8 | |||
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|short_description=p@chr4:87768946..87768955,- | |short_description=p@chr4:87768946..87768955,- | ||
}} | }} |
Latest revision as of 07:43, 30 July 2015
Short description: | p@chr4:87768946..87768955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:87768946..87768955, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epidermal cell | 7.82e-50 | 9 |
keratinocyte | 2.71e-40 | 5 |
stratified squamous epithelial cell | 8.35e-34 | 6 |
keratin accumulating cell | 8.35e-34 | 6 |
stratified epithelial cell | 8.35e-34 | 6 |
keratinizing barrier epithelial cell | 8.35e-34 | 6 |
epithelial fate stem cell | 8.35e-34 | 6 |
stratified epithelial stem cell | 8.35e-34 | 6 |
surface ectodermal cell | 8.35e-34 | 6 |
general ecto-epithelial cell | 1.81e-32 | 14 |
sebum secreting cell | 7.14e-26 | 2 |
epithelial cell of sweat gland | 7.14e-26 | 2 |
epithelial cell of skin gland | 7.14e-26 | 2 |
acinar cell of sebaceous gland | 7.14e-26 | 2 |
gingival epithelial cell | 8.00e-18 | 3 |
ecto-epithelial cell | 5.47e-14 | 34 |
acinar cell | 3.26e-11 | 5 |
protein secreting cell | 1.44e-09 | 6 |
squamous epithelial cell | 5.86e-08 | 63 |
ectodermal cell | 6.78e-07 | 72 |
glandular epithelial cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 2.22e-30 | 15 |
outer epithelium | 2.22e-30 | 15 |
enveloping layer of ectoderm | 2.22e-30 | 15 |
skin gland | 7.14e-26 | 2 |
epidermis gland | 7.14e-26 | 2 |
gland of integumental system | 7.14e-26 | 2 |
sebaceous gland | 7.14e-26 | 2 |
skin sebaceous gland | 7.14e-26 | 2 |
sweat gland | 7.14e-26 | 2 |
sweat gland placode | 7.14e-26 | 2 |
sebaceous gland placode | 7.14e-26 | 2 |
gingival epithelium | 8.00e-18 | 3 |
skin of body | 9.22e-12 | 41 |
integument | 1.39e-10 | 46 |
integumental system | 1.39e-10 | 46 |
surface structure | 7.68e-09 | 99 |
ecto-epithelium | 2.22e-08 | 104 |
epithelium of mucosa | 1.59e-07 | 8 |
gingiva | 1.59e-07 | 8 |