FFCP PHASE1:Hg19::chr5:115420945..115420957,-: Difference between revisions
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|id=chr5:115420945..115420957,-
|short_description=p@chr5:115420945..115420957,-
|description=CAGE_peak_at_chr5:115420945..115420957,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:115420945..115420957,- | |||
|coexpression_cluster_id=C992 | |||
|description=CAGE_peak_at_chr5:115420945..115420957,- | |||
|id=chr5:115420945..115420957,- | |||
|ontology_enrichment_celltype=CL:0000838!5.99e-14!52;CL:0000542!1.35e-13!53;CL:0000051!1.35e-13!53;CL:0000738!6.24e-13!140;CL:0000624!2.06e-12!6;CL:0000988!3.80e-12!182;CL:0000791!9.08e-12!18;CL:0000789!9.08e-12!18;CL:0002420!9.08e-12!18;CL:0002419!9.08e-12!18;CL:0000790!9.08e-12!18;CL:0002087!1.09e-10!119;CL:0000037!1.11e-10!172;CL:0000566!1.11e-10!172;CL:0000784!1.80e-10!3;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000898!1.47e-09!3;CL:0000842!2.26e-09!3;CL:0002031!3.43e-08!124;CL:0002032!2.82e-07!165;CL:0000837!2.82e-07!165;CL:0000224!4.08e-07!4;CL:0000815!5.04e-07!2;CL:0000792!5.04e-07!2;CL:0002677!5.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.11e-38;3!CL:0000623;2.29e-17;3!CL:0000236;1.10e-15;13!CL:0000542;5.82e-13;53!CL:0000451;4.97e-11;10!CL:0000945;1.31e-08;24!CL:0000047;1.81e-07;2!CL:0000791;8.75e-07;18!CL:0000789;8.75e-07;18!CL:0002419;8.75e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.75e-39,3;CL:0000838,2.38e-18,52;CL:0000542,5.50e-18,53;CL:0000051,5.50e-18,53;CL:0000623,2.30e-17,3;CL:0000825,2.30e-17,3;CL:0000236,1.03e-14,14;CL:0000738,1.19e-11,136;CL:0000451,4.81e-11,10;CL:0002087,1.50e-09,115;CL:0000037,3.80e-09,168;CL:0002031,4.19e-09,120;CL:0000945,1.11e-08,24;CL:0000826,1.11e-08,24;CL:0000988,1.33e-08,177;CL:0000791,9.97e-07,18;CL:0000789,9.97e-07,18;CL:0002420,9.97e-07,18;CL:0002419,9.97e-07,18;CL:0000790,9.97e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;5.82e-13;53!CL:0000790;8.75e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr5:115420945..115420957,- | |||
}} | }} |
Latest revision as of 08:54, 30 July 2015
Short description: | p@chr5:115420945..115420957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115420945..115420957, - |
Coexpression cluster: | C992_Dendritic_melanoma_immature_CD19_Basophils_CD14_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.75e-39 | 3 |
lymphoid lineage restricted progenitor cell | 2.38e-18 | 52 |
lymphocyte | 5.50e-18 | 53 |
common lymphoid progenitor | 5.50e-18 | 53 |
natural killer cell | 2.30e-17 | 3 |
pro-NK cell | 2.30e-17 | 3 |
B cell | 1.03e-14 | 14 |
leukocyte | 1.19e-11 | 136 |
dendritic cell | 4.81e-11 | 10 |
nongranular leukocyte | 1.50e-09 | 115 |
hematopoietic stem cell | 3.80e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 4.19e-09 | 120 |
lymphocyte of B lineage | 1.11e-08 | 24 |
pro-B cell | 1.11e-08 | 24 |
hematopoietic cell | 1.33e-08 | 177 |
mature alpha-beta T cell | 9.97e-07 | 18 |
alpha-beta T cell | 9.97e-07 | 18 |
immature T cell | 9.97e-07 | 18 |
mature T cell | 9.97e-07 | 18 |
immature alpha-beta T cell | 9.97e-07 | 18 |