FFCP PHASE1:Hg19::chr5:128795341..128795348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:128795341..128795348,+ | |||
|coexpression_cluster_id=C2569 | |||
|description=CAGE_peak_at_chr5:128795341..128795348,+ | |||
|id=chr5:128795341..128795348,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.11e-28!5;CL:0000540!2.13e-09!6;CL:0000031!2.13e-09!6;CL:0000404!2.13e-09!6;CL:0000047!3.77e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.42e-33;6!CL:0000404;2.42e-33;6!CL:0002319;2.19e-13;25!CL:0000123;2.74e-12;2!CL:0000242;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.56e-33,6;CL:0000031,3.56e-33,6;CL:0000404,3.56e-33,6;CL:0000047,4.24e-25,8;CL:0002319,2.27e-13,25;CL:0000242,2.07e-12,2;CL:0000133,3.82e-09,59;CL:0000221,1.48e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.42e-33;6 | |||
|ontology_enrichment_disease=DOID:5093!1.32e-13!4;DOID:1612!1.32e-13!4;DOID:0050619!6.02e-07!1;DOID:1357!6.02e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.50e-07;4!DOID:1612;6.50e-07;4!DOID:5409;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4;DOID:5409,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0006834!4.78e-07!1;UBERON:0007029!5.69e-07!1;UBERON:0001764!6.02e-07!1;UBERON:0001825!6.02e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,1.2781333715647,0.932949495138334,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,2.32991899054908,0,0,0,0,0,0,0,1.28602518772015,1.10031549277787,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,2.03302947670128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | |||
|short_description=p@chr5:128795341..128795348,+ | |||
}} |
Latest revision as of 09:24, 30 July 2015
Short description: | p@chr5:128795341..128795348, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:128795341..128795348, + |
Coexpression cluster: | C2569_small_MCF7_iPS_H9_hepatoblastoma_merkel_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.56e-33 | 6 |
neuroblast | 3.56e-33 | 6 |
electrically signaling cell | 3.56e-33 | 6 |
neuronal stem cell | 4.24e-25 | 8 |
neural cell | 2.27e-13 | 25 |
Merkel cell | 2.07e-12 | 2 |
neurectodermal cell | 3.82e-09 | 59 |
ectodermal cell | 1.48e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |
lung small cell carcinoma | 7.27e-07 | 4 |