FFCP PHASE1:Hg19::chr5:134364906..134364931,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:134364906..134364931,- to FFCP PHASE1:Hg19::chr5:134364906..134364931,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:134364906..134364931,- | |||
|coexpression_cluster_id=C2802 | |||
|description=CAGE_peak_at_chr5:134364906..134364931,- | |||
|id=chr5:134364906..134364931,- | |||
|ontology_enrichment_celltype=CL:0002076!2.78e-09!43;CL:0000223!7.19e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002623;5.15e-16;3!CL:0000622;8.21e-10;5!CL:0000138;1.75e-08;6!CL:0000154;2.98e-08;6!CL:0002504;3.54e-08;3!CL:1000279;3.54e-08;3!CL:1000280;3.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.43e-16,3;CL:0000622,5.28e-10,5;CL:0000154,2.07e-08,6;CL:0000058,2.23e-08,6;CL:0000138,2.23e-08,6;CL:0002504,3.81e-08,3;CL:1000279,3.81e-08,3;CL:1000280,3.81e-08,3;CL:0002599,9.15e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.57e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.17e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.61e-24!155;UBERON:0001555!4.61e-24!155;UBERON:0007026!4.61e-24!155;UBERON:0004921!2.02e-21!129;UBERON:0004185!2.02e-21!129;UBERON:0004119!2.75e-21!169;UBERON:0000925!2.75e-21!169;UBERON:0006595!2.75e-21!169;UBERON:0000161!1.12e-20!35;UBERON:0000077!3.53e-16!130;UBERON:0001004!1.86e-12!72;UBERON:0001046!5.87e-12!19;UBERON:0000166!1.04e-11!21;UBERON:0003104!1.57e-11!238;UBERON:0009142!1.57e-11!238;UBERON:0000162!1.76e-10!14;UBERON:0001353!1.76e-10!14;UBERON:0000163!1.76e-10!14;UBERON:0006866!1.76e-10!14;UBERON:0000164!1.76e-10!14;UBERON:0000931!1.76e-10!14;UBERON:0001737!1.91e-10!9;UBERON:0000165!3.39e-10!28;UBERON:0000930!3.39e-10!28;UBERON:0004122!1.36e-09!15;UBERON:0000481!1.67e-09!347;UBERON:0001041!3.60e-09!98;UBERON:0002367!4.03e-09!11;UBERON:0010147!4.03e-09!11;UBERON:0009846!4.03e-09!11;UBERON:0003353!4.03e-09!11;UBERON:0004902!4.03e-09!11;UBERON:0003820!4.03e-09!11;UBERON:0009847!4.03e-09!11;UBERON:0001557!3.31e-08!19;UBERON:0003937!3.45e-08!12;UBERON:0005399!3.45e-08!12;UBERON:0000072!5.88e-08!46;UBERON:0000059!1.03e-07!11;UBERON:0008947!5.09e-07!38;UBERON:0003258!5.09e-07!38;UBERON:0001044!5.57e-07!6;UBERON:0003293!5.57e-07!6;UBERON:0003294!5.57e-07!6;UBERON:0010047!5.57e-07!6;UBERON:0000167!5.57e-07!6;UBERON:0000065!5.58e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.21e-15;33!UBERON:0001041;4.65e-13;14!UBERON:0000007;6.38e-12;2!UBERON:0001555;3.85e-09;54!UBERON:0000165;2.68e-08;28!UBERON:0001043;2.81e-08;3!UBERON:0001044;2.98e-08;6!UBERON:0003293;2.98e-08;6!UBERON:0003294;2.98e-08;6!UBERON:0010047;2.98e-08;6!UBERON:0003408;2.98e-08;6!UBERON:0000167;2.98e-08;6!UBERON:0001723;3.54e-08;3!UBERON:0001033;3.54e-08;3!UBERON:0002372;6.76e-07;1!UBERON:0001961;6.76e-07;1!UBERON:0001744;6.76e-07;1!UBERON:0001042;6.76e-07;1!UBERON:0001735;6.76e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,3.01e-15,36;UBERON:0000007,7.52e-12,2;UBERON:0004921,1.44e-11,118;UBERON:0000166,7.79e-11,22;UBERON:0001007,8.92e-10,145;UBERON:0001555,8.92e-10,145;UBERON:0007026,8.92e-10,145;UBERON:0004119,1.81e-08,160;UBERON:0000925,1.81e-08,160;UBERON:0006595,1.81e-08,160;UBERON:0001044,2.07e-08,6;UBERON:0003293,2.07e-08,6;UBERON:0003294,2.07e-08,6;UBERON:0010047,2.07e-08,6;UBERON:0000167,2.07e-08,6;UBERON:0001043,2.49e-08,3;UBERON:0009143,2.49e-08,3;UBERON:0001723,3.81e-08,3;UBERON:0001033,3.81e-08,3;UBERON:0010056,3.81e-08,3;UBERON:0000165,5.37e-08,29;UBERON:0000930,5.37e-08,29;UBERON:0002372,6.96e-07,1;UBERON:0001961,6.96e-07,1;UBERON:0001744,6.96e-07,1;UBERON:0001735,6.96e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,1.00267582127178,3.62116297402059,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,1.74953878978203,1.95184561879831,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33834194858309,3.29444435683266,0.942499218765491,0,0,0,2.92580243453754,0,0,0.409499734223957,1.41405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0.354761064070598,0.844430541190656,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.783399478865116,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,3.1668811219199,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,6.13886844272246,1.08507746200627,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0.846452843541768,0,0.23056390438806,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.0967563312890851,0,0.328461828212837,7.08019820365462,0,0.90392296312213,0,0,0,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0,1.64985824231757,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.489473409012935,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.294443155503077,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,4.24875922965642,2.27662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0.470958557103084,0,0.280272163313789,1.82631744101899,0,0,1.21510125100316,0.158013611732727,0,0,6.41369091784202,1.86494547746733,1.7071847709395,2.76503864725637,0.860454717640555,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,1.22574160876953,0,0,0,0,0.679708458751268,0,0,0,0.178553938605658,0.705789743431384,0.0802413666891683,2.92134555298607,0.917458566809082,0,0,0,0,0,1.48798007266701,0.462175628631418,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,2.77204176471275,0.23806443146374,0,0,0,0,0,3.26575121845442,2.39563310759697,4.10847523388984,0.502055437748735,1.33064142618405,0,0,0,0,0,0,1.62758471326295,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,1.00267582127178,3.62116297402059,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,1.74953878978203,1.95184561879831,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33834194858309,3.29444435683266,0.942499218765491,0,0,0,2.92580243453754,0,0,0.409499734223957,1.41405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0.354761064070598,0.844430541190656,0.658589785919804,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.783399478865116,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,3.1668811219199,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,6.13886844272246,1.08507746200627,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0.846452843541768,0,0.23056390438806,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.0967563312890851,0,0.328461828212837,7.08019820365462,0,0.90392296312213,0,0,0,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0,1.64985824231757,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.489473409012935,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.294443155503077,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,4.24875922965642,2.27662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0.470958557103084,0,0.280272163313789,1.82631744101899,0,0,1.21510125100316,0.158013611732727,0,0,6.41369091784202,1.86494547746733,1.7071847709395,2.76503864725637,0.860454717640555,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,1.22574160876953,0,0,0,0,0.679708458751268,0,0,0,0.178553938605658,0.705789743431384,0.0802413666891683,2.92134555298607,0.917458566809082,0,0,0,0,0,1.48798007266701,0.462175628631418,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,2.77204176471275,0.23806443146374,0,0,0,0,0,3.26575121845442,2.39563310759697,4.10847523388984,0.502055437748735,1.33064142618405,0,0,0,0,0,0,1.62758471326295,0.665756774185513,0,0 | ||
|short_description=p@chr5:134364906..134364931,- | |||
}} | }} |
Latest revision as of 09:55, 30 July 2015
Short description: | p@chr5:134364906..134364931, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134364906..134364931, - |
Coexpression cluster: | C2802_esophagus_Prostate_biphenotypic_cervical_tonsil_Smooth_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.43e-16 | 3 |
acinar cell | 5.28e-10 | 5 |
protein secreting cell | 2.07e-08 | 6 |
chondroblast | 2.23e-08 | 6 |
chondrocyte | 2.23e-08 | 6 |
enteric smooth muscle cell | 3.81e-08 | 3 |
smooth muscle cell of large intestine | 3.81e-08 | 3 |
smooth muscle cell of colon | 3.81e-08 | 3 |
smooth muscle cell of the esophagus | 9.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
orifice | 3.01e-15 | 36 |
pituitary gland | 7.52e-12 | 2 |
subdivision of digestive tract | 1.44e-11 | 118 |
oral opening | 7.79e-11 | 22 |
digestive system | 8.92e-10 | 145 |
digestive tract | 8.92e-10 | 145 |
primitive gut | 8.92e-10 | 145 |
endoderm-derived structure | 1.81e-08 | 160 |
endoderm | 1.81e-08 | 160 |
presumptive endoderm | 1.81e-08 | 160 |
saliva-secreting gland | 2.07e-08 | 6 |
gland of oral region | 2.07e-08 | 6 |
gland of foregut | 2.07e-08 | 6 |
oral gland | 2.07e-08 | 6 |
oral cavity | 2.07e-08 | 6 |
esophagus | 2.49e-08 | 3 |
esophageal region | 2.49e-08 | 3 |
tongue | 3.81e-08 | 3 |
gustatory system | 3.81e-08 | 3 |
future tongue | 3.81e-08 | 3 |
mouth | 5.37e-08 | 29 |
stomodeum | 5.37e-08 | 29 |
tonsil | 6.96e-07 | 1 |
mucosa-associated lymphoid tissue | 6.96e-07 | 1 |
lymphoid tissue | 6.96e-07 | 1 |
tonsillar ring | 6.96e-07 | 1 |