FFCP PHASE1:Hg19::chr5:134906921..134906955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134906921..134906955,- | |||
|coexpression_cluster_id=C607 | |coexpression_cluster_id=C607 | ||
|description=CAGE_peak_at_chr5:134906921..134906955,- | |description=CAGE_peak_at_chr5:134906921..134906955,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.36e-14;2!CL:1000448;2.36e-14;2!CL:0002308;2.36e-14;2!CL:0002140;2.36e-14;2!CL:0002159;1.29e-07;14!CL:0000362;3.54e-07;9 | |ontology_enrichment_celltype_v019=CL:0000317;2.36e-14;2!CL:1000448;2.36e-14;2!CL:0002308;2.36e-14;2!CL:0002140;2.36e-14;2!CL:0002159;1.29e-07;14!CL:0000362;3.54e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.37e-14,2;CL:1000448,2.37e-14,2;CL:0002308,2.37e-14,2;CL:0002140,2.37e-14,2;CL:0002159,1.25e-07,14;CL:0000362,3.55e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.75e-08;1!UBERON:0001045;1.79e-07;1!UBERON:0010227;1.79e-07;1!UBERON:0004874;1.79e-07;1 | |ontology_enrichment_development_v019=UBERON:0000358;7.75e-08;1!UBERON:0001045;1.79e-07;1!UBERON:0010227;1.79e-07;1!UBERON:0004874;1.79e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.75e-08;1!DOID:1357;7.75e-08;1!DOID:3151;1.79e-07;1!DOID:3149;1.79e-07;1 | |ontology_enrichment_disease_v019=DOID:0050619;7.75e-08;1!DOID:1357;7.75e-08;1!DOID:3151;1.79e-07;1!DOID:3149;1.79e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.37e-08,1;DOID:1357,6.37e-08,1;DOID:3151,1.91e-07,1;DOID:3149,1.91e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002419;2.36e-14;2!UBERON:0007771;2.36e-14;2!UBERON:0003297;2.36e-14;2!UBERON:0001821;2.36e-14;2!UBERON:0003487;2.36e-14;2!UBERON:0001820;2.36e-14;2!UBERON:0000160;4.09e-12;17!UBERON:0005409;2.31e-09;22!UBERON:0007029;5.95e-08;1!UBERON:0001764;7.75e-08;1!UBERON:0001825;7.75e-08;1!UBERON:0002079;1.79e-07;1!UBERON:0001154;1.79e-07;1!UBERON:0000989;1.79e-07;1!UBERON:0001301;1.79e-07;1!UBERON:0001153;1.79e-07;1!UBERON:0008811;1.79e-07;1!UBERON:0009854;1.79e-07;1!UBERON:0000014;2.71e-07;4!UBERON:0001003;3.14e-07;15!UBERON:0007376;3.14e-07;15!UBERON:0001155;8.71e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002419;2.36e-14;2!UBERON:0007771;2.36e-14;2!UBERON:0003297;2.36e-14;2!UBERON:0001821;2.36e-14;2!UBERON:0003487;2.36e-14;2!UBERON:0001820;2.36e-14;2!UBERON:0000160;4.09e-12;17!UBERON:0005409;2.31e-09;22!UBERON:0007029;5.95e-08;1!UBERON:0001764;7.75e-08;1!UBERON:0001825;7.75e-08;1!UBERON:0002079;1.79e-07;1!UBERON:0001154;1.79e-07;1!UBERON:0000989;1.79e-07;1!UBERON:0001301;1.79e-07;1!UBERON:0001153;1.79e-07;1!UBERON:0008811;1.79e-07;1!UBERON:0009854;1.79e-07;1!UBERON:0000014;2.71e-07;4!UBERON:0001003;3.14e-07;15!UBERON:0007376;3.14e-07;15!UBERON:0001155;8.71e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.37e-14,2;UBERON:0007771,2.37e-14,2;UBERON:0003297,2.37e-14,2;UBERON:0001821,2.37e-14,2;UBERON:0003487,2.37e-14,2;UBERON:0001820,2.37e-14,2;UBERON:0005089,2.37e-14,2;UBERON:0005088,2.37e-14,2;UBERON:0000160,4.36e-12,17;UBERON:0005409,3.36e-08,25;UBERON:0007029,5.96e-08,1;UBERON:0001764,6.37e-08,1;UBERON:0001825,6.37e-08,1;UBERON:0001301,1.39e-07,1;UBERON:0000989,1.48e-07,1;UBERON:0008811,1.48e-07,1;UBERON:0006258,1.48e-07,1;UBERON:0005876,1.48e-07,1;UBERON:0004874,1.48e-07,1;UBERON:0002079,1.69e-07,1;UBERON:0001154,2.80e-07,1;UBERON:0001153,2.80e-07,1;UBERON:0001045,2.80e-07,1;UBERON:0000014,2.80e-07,4;UBERON:0001003,3.14e-07,15;UBERON:0007376,3.14e-07,15;UBERON:0007383,3.14e-07,15 | |||
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|short_description=p@chr5:134906921..134906955,- | |short_description=p@chr5:134906921..134906955,- | ||
}} | }} |
Latest revision as of 09:59, 30 July 2015
Short description: | p@chr5:134906921..134906955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906921..134906955, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.37e-14 | 2 |
epithelial cell of sweat gland | 2.37e-14 | 2 |
epithelial cell of skin gland | 2.37e-14 | 2 |
acinar cell of sebaceous gland | 2.37e-14 | 2 |
general ecto-epithelial cell | 1.25e-07 | 14 |
epidermal cell | 3.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.37e-14 | 2 |
epidermis gland | 2.37e-14 | 2 |
gland of integumental system | 2.37e-14 | 2 |
sebaceous gland | 2.37e-14 | 2 |
skin sebaceous gland | 2.37e-14 | 2 |
sweat gland | 2.37e-14 | 2 |
sweat gland placode | 2.37e-14 | 2 |
sebaceous gland placode | 2.37e-14 | 2 |
intestine | 4.36e-12 | 17 |
gastrointestinal system | 3.36e-08 | 25 |
surface | 5.96e-08 | 1 |
maxillary sinus | 6.37e-08 | 1 |
paranasal sinus | 6.37e-08 | 1 |
epididymis | 1.39e-07 | 1 |
penis | 1.48e-07 | 1 |
intromittent organ | 1.48e-07 | 1 |
lateral plate mesenchyme | 1.48e-07 | 1 |
undifferentiated genital tubercle | 1.48e-07 | 1 |
somatopleure | 1.48e-07 | 1 |
left cardiac atrium | 1.69e-07 | 1 |
vermiform appendix | 2.80e-07 | 1 |
caecum | 2.80e-07 | 1 |
midgut | 2.80e-07 | 1 |
zone of skin | 2.80e-07 | 4 |
skin epidermis | 3.14e-07 | 15 |
outer epithelium | 3.14e-07 | 15 |
enveloping layer of ectoderm | 3.14e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.37e-08 | 1 |
maxillary sinus cancer | 6.37e-08 | 1 |
skin squamous cell carcinoma | 1.91e-07 | 1 |
keratoacanthoma | 1.91e-07 | 1 |