FFCP PHASE1:Hg19::chr5:134907261..134907265,-: Difference between revisions
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|id=chr5:134907261..134907265,-
|short_description=p@chr5:134907261..134907265,-
|description=CAGE_peak_at_chr5:134907261..134907265,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:134907261..134907265,- | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134907261..134907265,- | |||
|id=chr5:134907261..134907265,- | |||
|ontology_enrichment_celltype=CL:0000064!4.23e-08!3;CL:0005012!4.23e-08!3;CL:0000067!4.23e-08!3;CL:0002304!4.23e-08!3;CL:0000342!9.25e-07!1;CL:0002565!9.25e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:4362;3.26e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:4362,2.94e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.01e-12!4;UBERON:0007023!1.05e-12!115;UBERON:0002203!1.21e-08!6;UBERON:0001768!1.21e-08!6;UBERON:0001778!4.23e-08!3;UBERON:0001775!4.23e-08!3;UBERON:0002200!5.29e-08!11;UBERON:0006876!5.29e-08!11;UBERON:0000989!4.18e-07!1;UBERON:0008811!4.18e-07!1;UBERON:0006258!4.18e-07!1;UBERON:0005876!4.18e-07!1;UBERON:0004874!4.18e-07!1;UBERON:0001736!4.43e-07!1;UBERON:0006298!4.43e-07!1;UBERON:0002171!4.69e-07!1;UBERON:0006518!4.69e-07!1;UBERON:0008949!4.69e-07!1;UBERON:0000101!4.69e-07!1;UBERON:0002167!4.69e-07!1;UBERON:0001301!8.75e-07!1;UBERON:0002506!9.25e-07!1;UBERON:0001769!9.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0003350,1.69e-07,8;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr5:134907261..134907265,- | |||
}} | }} |
Latest revision as of 09:59, 30 July 2015
Short description: | p@chr5:134907261..134907265, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134907261..134907265, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
epithelium of mucosa | 1.69e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |