FFCP PHASE1:Hg19::chr5:147209673..147209678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:147209673..147209678,- | |||
|coexpression_cluster_id=C1197 | |coexpression_cluster_id=C1197 | ||
|description=CAGE_peak_at_chr5:147209673..147209678,- | |description=CAGE_peak_at_chr5:147209673..147209678,- | ||
|id=chr5:147209673..147209678,- | |id=chr5:147209673..147209678,- | ||
|ontology_enrichment_celltype=CL:0000181!1.54e-11!12;CL:0000417!1.54e-11!12;CL:0000668!1.54e-11!12;CL:0000414!1.54e-11!12;CL:0000412!1.54e-11!12;CL:0000182!1.54e-11!12;CL:0002097!2.48e-08!2 | |ontology_enrichment_celltype=CL:0000181!1.54e-11!12;CL:0000417!1.54e-11!12;CL:0000668!1.54e-11!12;CL:0000414!1.54e-11!12;CL:0000412!1.54e-11!12;CL:0000182!1.54e-11!12;CL:0002097!2.48e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.26e-13;11!UBERON:0009497;3.65e-11;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.57e-12!19;UBERON:0006925!1.57e-12!19;UBERON:0008836!1.57e-12!19;UBERON:0000949!2.89e-11!45;UBERON:0008835!7.39e-11!22;UBERON:0003894!7.39e-11!22;UBERON:0009854!2.14e-10!23;UBERON:0002368!2.67e-10!35;UBERON:0007499!1.39e-09!25;UBERON:0009497!1.39e-09!25;UBERON:0000015!1.39e-09!25;UBERON:0002423!1.39e-09!25;UBERON:0006235!1.39e-09!25;UBERON:0004161!1.39e-09!25;UBERON:0005057!3.18e-09!26;UBERON:0009856!3.18e-09!26;UBERON:0005172!3.76e-09!55;UBERON:0005173!3.76e-09!55;UBERON:0002530!1.82e-08!59;UBERON:0002417!3.22e-08!61;UBERON:0000916!3.22e-08!61;UBERON:0005177!7.52e-08!107;UBERON:0002365!9.03e-08!31;UBERON:0002330!9.03e-08!31 | |ontology_enrichment_uberon=UBERON:0002107!1.57e-12!19;UBERON:0006925!1.57e-12!19;UBERON:0008836!1.57e-12!19;UBERON:0000949!2.89e-11!45;UBERON:0008835!7.39e-11!22;UBERON:0003894!7.39e-11!22;UBERON:0009854!2.14e-10!23;UBERON:0002368!2.67e-10!35;UBERON:0007499!1.39e-09!25;UBERON:0009497!1.39e-09!25;UBERON:0000015!1.39e-09!25;UBERON:0002423!1.39e-09!25;UBERON:0006235!1.39e-09!25;UBERON:0004161!1.39e-09!25;UBERON:0005057!3.18e-09!26;UBERON:0009856!3.18e-09!26;UBERON:0005172!3.76e-09!55;UBERON:0005173!3.76e-09!55;UBERON:0002530!1.82e-08!59;UBERON:0002417!3.22e-08!61;UBERON:0000916!3.22e-08!61;UBERON:0005177!7.52e-08!107;UBERON:0002365!9.03e-08!31;UBERON:0002330!9.03e-08!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.49e-28;19!UBERON:0006925;2.49e-28;19!UBERON:0002423;1.03e-21;25!UBERON:0002365;3.27e-18;31!UBERON:0002330;3.27e-18;31!UBERON:0002368;6.20e-14;33!UBERON:0000949;7.88e-13;43!UBERON:0005172;1.81e-08;52!UBERON:0005173;1.81e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0000949,8.25e-19,45;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005177,1.22e-08,101;UBERON:0005911,5.11e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0355267421047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0355267421047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:147209673..147209678,- | |short_description=p@chr5:147209673..147209678,- | ||
}} | }} |
Latest revision as of 11:14, 30 July 2015
Short description: | p@chr5:147209673..147209678, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:147209673..147209678, - |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
endocrine system | 8.25e-19 | 45 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
trunk region element | 1.22e-08 | 101 |
endo-epithelium | 5.11e-07 | 82 |