FFCP PHASE1:Hg19::chr5:149537807..149537827,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:149537807..149537827,- | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr5:149537807..149537827,- | |description=CAGE_peak_at_chr5:149537807..149537827,- | ||
|id=chr5:149537807..149537827,- | |id=chr5:149537807..149537827,- | ||
|ontology_enrichment_celltype=CL:0002620!7.90e-14!23;CL:0000057!1.06e-10!75 | |ontology_enrichment_celltype=CL:0002620!7.90e-14!23;CL:0000057!1.06e-10!75 | ||
|ontology_enrichment_celltype_v019=CL:0002575;4.49e-30;2!CL:0002549;1.07e-29;2!CL:0000669;1.44e-15;4!CL:0002367;2.31e-08;2!CL:0002570;4.34e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.49e-30,2;CL:0002549,1.08e-29,2;CL:0000669,1.44e-15,4;CL:0002367,2.87e-08,2;CL:0002570,3.77e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.06e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.31e-08;2!DOID:4236;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.15e-08,2;DOID:4236,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.29e-11!45;UBERON:0002416!2.29e-11!45;UBERON:0002097!2.23e-08!40;UBERON:0007023!2.25e-08!115;UBERON:0002616!6.25e-08!59;UBERON:0000153!7.01e-08!129;UBERON:0007811!7.01e-08!129;UBERON:0003102!1.71e-07!95;UBERON:0000475!3.64e-07!365;UBERON:0000955!3.74e-07!69;UBERON:0006238!3.74e-07!69;UBERON:0002200!4.39e-07!11;UBERON:0006876!4.39e-07!11;UBERON:0000033!5.63e-07!123 | |ontology_enrichment_uberon=UBERON:0002199!2.29e-11!45;UBERON:0002416!2.29e-11!45;UBERON:0002097!2.23e-08!40;UBERON:0007023!2.25e-08!115;UBERON:0002616!6.25e-08!59;UBERON:0000153!7.01e-08!129;UBERON:0007811!7.01e-08!129;UBERON:0003102!1.71e-07!95;UBERON:0000475!3.64e-07!365;UBERON:0000955!3.74e-07!69;UBERON:0006238!3.74e-07!69;UBERON:0002200!4.39e-07!11;UBERON:0006876!4.39e-07!11;UBERON:0000033!5.63e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.07e-29;2!UBERON:0005358;1.07e-29;2!UBERON:0001886;1.07e-29;2!UBERON:0004086;1.07e-29;2!UBERON:0005282;1.07e-29;2!UBERON:0005281;1.07e-29;2!UBERON:0005284;1.69e-12;5!UBERON:0006876;2.58e-12;11!UBERON:0001013;9.51e-10;14!UBERON:0005969;2.31e-08;2!UBERON:0003956;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.08e-29,2;UBERON:0005358,1.08e-29,2;UBERON:0001886,1.08e-29,2;UBERON:0004086,1.08e-29,2;UBERON:0005282,1.08e-29,2;UBERON:0005281,1.08e-29,2;UBERON:0005284,1.69e-12,5;UBERON:0006876,2.90e-12,11;UBERON:0001013,8.44e-10,14;UBERON:0005969,2.87e-08,2;UBERON:0003956,2.87e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,1.06400514659507,0,0,0,0,0,0,2.72443369760877,2.30470369792,0.468642863667593,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0,0.125118519871964,0,0,1.22595118319608,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,1.03056216018252,0.37223371266318,0.168776332241266,0,0.252433774244115,0.368199594569197,0.484938170456436,1.42003837006646,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.784917590417525,0.87192013766656,0.2933531432838,0,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.178428988797162,0.473107245101804,0.585707074963566,0,0,0,0,0,0.173767228936166,9.00685324328607,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0.537101224341368,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,1.33053555243958,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,1.06400514659507,0,0,0,0,0,0,2.72443369760877,2.30470369792,0.468642863667593,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0,0.125118519871964,0,0,1.22595118319608,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,1.03056216018252,0.37223371266318,0.168776332241266,0,0.252433774244115,0.368199594569197,0.484938170456436,1.42003837006646,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.784917590417525,0.87192013766656,0.2933531432838,0,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.178428988797162,0.473107245101804,0.585707074963566,0,0,0,0,0,0.173767228936166,9.00685324328607,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0.537101224341368,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0.427149650270779,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,1.33053555243958,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr5:149537807..149537827,- | |short_description=p@chr5:149537807..149537827,- | ||
}} | }} |
Latest revision as of 11:29, 30 July 2015
Short description: | p@chr5:149537807..149537827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:149537807..149537827, - |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.49e-30 | 2 |
fibroblast of choroid plexus | 1.08e-29 | 2 |
pericyte cell | 1.44e-15 | 4 |
trabecular meshwork cell | 2.87e-08 | 2 |
mesenchymal stem cell of adipose | 3.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.08e-29 | 2 |
ventricle of nervous system | 1.08e-29 | 2 |
choroid plexus | 1.08e-29 | 2 |
brain ventricle | 1.08e-29 | 2 |
ventricular system of brain | 1.08e-29 | 2 |
ventricular system of central nervous system | 1.08e-29 | 2 |
brain vasculature | 1.69e-12 | 5 |
vasculature of organ | 2.90e-12 | 11 |
adipose tissue | 8.44e-10 | 14 |
reticulum trabeculare | 2.87e-08 | 2 |
aqueous drainage system | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.15e-08 | 2 |
carcinosarcoma | 2.15e-08 | 2 |