FFCP PHASE1:Hg19::chr5:149537807..149537827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:149537807..149537827,- | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr5:149537807..149537827,- | |description=CAGE_peak_at_chr5:149537807..149537827,- | ||
|id=chr5:149537807..149537827,- | |id=chr5:149537807..149537827,- | ||
|ontology_enrichment_celltype=CL:0002620!7.90e-14!23;CL:0000057!1.06e-10!75 | |ontology_enrichment_celltype=CL:0002620!7.90e-14!23;CL:0000057!1.06e-10!75 | ||
|ontology_enrichment_celltype_v019=CL:0002575;4.49e-30;2!CL:0002549;1.07e-29;2!CL:0000669;1.44e-15;4!CL:0002367;2.31e-08;2!CL:0002570;4.34e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.49e-30,2;CL:0002549,1.08e-29,2;CL:0000669,1.44e-15,4;CL:0002367,2.87e-08,2;CL:0002570,3.77e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.06e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;2.31e-08;2!DOID:4236;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.15e-08,2;DOID:4236,2.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.29e-11!45;UBERON:0002416!2.29e-11!45;UBERON:0002097!2.23e-08!40;UBERON:0007023!2.25e-08!115;UBERON:0002616!6.25e-08!59;UBERON:0000153!7.01e-08!129;UBERON:0007811!7.01e-08!129;UBERON:0003102!1.71e-07!95;UBERON:0000475!3.64e-07!365;UBERON:0000955!3.74e-07!69;UBERON:0006238!3.74e-07!69;UBERON:0002200!4.39e-07!11;UBERON:0006876!4.39e-07!11;UBERON:0000033!5.63e-07!123 | |ontology_enrichment_uberon=UBERON:0002199!2.29e-11!45;UBERON:0002416!2.29e-11!45;UBERON:0002097!2.23e-08!40;UBERON:0007023!2.25e-08!115;UBERON:0002616!6.25e-08!59;UBERON:0000153!7.01e-08!129;UBERON:0007811!7.01e-08!129;UBERON:0003102!1.71e-07!95;UBERON:0000475!3.64e-07!365;UBERON:0000955!3.74e-07!69;UBERON:0006238!3.74e-07!69;UBERON:0002200!4.39e-07!11;UBERON:0006876!4.39e-07!11;UBERON:0000033!5.63e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.07e-29;2!UBERON:0005358;1.07e-29;2!UBERON:0001886;1.07e-29;2!UBERON:0004086;1.07e-29;2!UBERON:0005282;1.07e-29;2!UBERON:0005281;1.07e-29;2!UBERON:0005284;1.69e-12;5!UBERON:0006876;2.58e-12;11!UBERON:0001013;9.51e-10;14!UBERON:0005969;2.31e-08;2!UBERON:0003956;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.08e-29,2;UBERON:0005358,1.08e-29,2;UBERON:0001886,1.08e-29,2;UBERON:0004086,1.08e-29,2;UBERON:0005282,1.08e-29,2;UBERON:0005281,1.08e-29,2;UBERON:0005284,1.69e-12,5;UBERON:0006876,2.90e-12,11;UBERON:0001013,8.44e-10,14;UBERON:0005969,2.87e-08,2;UBERON:0003956,2.87e-08,2 | |||
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| ||
|short_description=p@chr5:149537807..149537827,- | |short_description=p@chr5:149537807..149537827,- | ||
}} | }} |
Latest revision as of 11:29, 30 July 2015
Short description: | p@chr5:149537807..149537827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:149537807..149537827, - |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.49e-30 | 2 |
fibroblast of choroid plexus | 1.08e-29 | 2 |
pericyte cell | 1.44e-15 | 4 |
trabecular meshwork cell | 2.87e-08 | 2 |
mesenchymal stem cell of adipose | 3.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.08e-29 | 2 |
ventricle of nervous system | 1.08e-29 | 2 |
choroid plexus | 1.08e-29 | 2 |
brain ventricle | 1.08e-29 | 2 |
ventricular system of brain | 1.08e-29 | 2 |
ventricular system of central nervous system | 1.08e-29 | 2 |
brain vasculature | 1.69e-12 | 5 |
vasculature of organ | 2.90e-12 | 11 |
adipose tissue | 8.44e-10 | 14 |
reticulum trabeculare | 2.87e-08 | 2 |
aqueous drainage system | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.15e-08 | 2 |
carcinosarcoma | 2.15e-08 | 2 |