FFCP PHASE1:Hg19::chr5:167247103..167247112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:167247103..167247112,+ | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr5:167247103..167247112,+ | |||
|id=chr5:167247103..167247112,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.27e-35!13;CL:0002368!2.62e-34!13;CL:0002076!7.94e-30!43;CL:0002166!9.42e-23!3;CL:0002621!1.26e-22!3;CL:0000223!4.98e-21!59;CL:0002077!1.56e-16!33;CL:0000317!3.83e-16!2;CL:1000448!3.83e-16!2;CL:0002308!3.83e-16!2;CL:0002140!3.83e-16!2;CL:0000362!3.95e-15!8;CL:0002202!4.01e-13!9;CL:0002632!4.01e-13!9;CL:0000066!4.62e-12!254;CL:0000240!2.39e-11!6;CL:0000311!2.39e-11!6;CL:0000079!2.39e-11!6;CL:0000237!2.39e-11!6;CL:0000036!2.39e-11!6;CL:0000357!2.39e-11!6;CL:0000114!2.39e-11!6;CL:0000220!3.43e-11!246;CL:0002321!4.56e-11!248;CL:0000068!1.11e-10!3;CL:0000069!1.11e-10!3;CL:0000307!1.11e-10!3;CL:0000377!1.11e-10!3;CL:0002328!1.28e-10!3;CL:0002251!2.47e-08!21;CL:0000221!2.89e-08!71;CL:0002336!3.53e-08!1;CL:0002261!3.53e-08!1;CL:0002170!3.53e-08!1;CL:0000622!5.77e-07!5;CL:0000312!8.65e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.12e-53;3!CL:0002159;5.85e-46;14!CL:0000317;2.07e-37;2!CL:1000448;2.07e-37;2!CL:0002308;2.07e-37;2!CL:0002140;2.07e-37;2!CL:0002621;6.60e-25;3!CL:0000362;6.80e-19;9!CL:0002077;1.21e-16;34!CL:0000622;1.26e-15;5!CL:0000154;3.44e-13;6!CL:0000150;4.17e-09;9!CL:0000307;2.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.79e-54,3;CL:0002159,4.28e-46,14;CL:0000317,1.89e-37,2;CL:1000448,1.89e-37,2;CL:0002308,1.89e-37,2;CL:0002140,1.89e-37,2;CL:0002621,8.95e-25,3;CL:0002077,5.25e-19,34;CL:0000362,6.02e-19,9;CL:0000622,1.21e-15,5;CL:0000154,3.34e-13,6;CL:0000150,4.09e-09,9;CL:0000221,1.16e-08,72;CL:0000068,2.47e-07,3;CL:0000069,2.47e-07,3;CL:0000307,2.47e-07,3;CL:0000377,2.47e-07,3;CL:0002076,3.31e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;2.25e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.26e-22!3;UBERON:0001708!3.23e-17!4;UBERON:0001704!3.23e-17!4;UBERON:0002419!3.83e-16!2;UBERON:0007771!3.83e-16!2;UBERON:0003297!3.83e-16!2;UBERON:0001821!3.83e-16!2;UBERON:0003487!3.83e-16!2;UBERON:0001820!3.83e-16!2;UBERON:0005089!3.83e-16!2;UBERON:0005088!3.83e-16!2;UBERON:0001004!2.07e-14!72;UBERON:0002090!1.17e-11!6;UBERON:0004815!1.28e-10!3;UBERON:0002031!1.28e-10!3;UBERON:0003102!2.69e-10!95;UBERON:0000065!1.37e-09!53;UBERON:0004807!7.72e-09!28;UBERON:0001828!8.12e-09!8;UBERON:0001003!1.06e-08!14;UBERON:0007376!1.06e-08!14;UBERON:0007383!1.06e-08!14;UBERON:0007196!1.74e-08!14;UBERON:0001558!1.74e-08!14;UBERON:0002185!3.54e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.71e-40;4!UBERON:0008895;1.71e-40;4!UBERON:0002419;2.07e-37;2!UBERON:0007771;2.07e-37;2!UBERON:0003297;2.07e-37;2!UBERON:0001821;2.07e-37;2!UBERON:0003487;2.07e-37;2!UBERON:0001820;2.07e-37;2!UBERON:0011159;1.43e-32;5!UBERON:0001949;6.60e-25;3!UBERON:0011137;3.18e-15;11!UBERON:0010323;3.18e-15;11!UBERON:0010371;1.06e-14;31!UBERON:0001003;1.32e-11;15!UBERON:0007376;1.32e-11;15!UBERON:0003929;2.90e-11;7!UBERON:0000075;1.13e-10;16!UBERON:0003350;5.67e-10;8!UBERON:0001828;5.67e-10;8!UBERON:0000486;6.07e-07;12!UBERON:0004765;8.71e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.31e-40,4;UBERON:0008895,1.31e-40,4;UBERON:0002419,1.89e-37,2;UBERON:0007771,1.89e-37,2;UBERON:0003297,1.89e-37,2;UBERON:0001821,1.89e-37,2;UBERON:0003487,1.89e-37,2;UBERON:0001820,1.89e-37,2;UBERON:0005089,1.89e-37,2;UBERON:0005088,1.89e-37,2;UBERON:0011159,1.15e-32,5;UBERON:0010188,2.32e-27,6;UBERON:0002539,2.32e-27,6;UBERON:0008816,2.32e-27,6;UBERON:0001949,8.95e-25,3;UBERON:0010323,2.88e-15,11;UBERON:0011137,3.86e-12,14;UBERON:0001003,1.23e-11,15;UBERON:0007376,1.23e-11,15;UBERON:0007383,1.23e-11,15;UBERON:0003102,3.35e-11,99;UBERON:0000075,1.06e-10,16;UBERON:0003350,6.34e-10,8;UBERON:0001828,6.34e-10,8;UBERON:0008814,1.40e-09,18;UBERON:0000033,4.57e-08,56;UBERON:0000153,2.75e-07,62;UBERON:0007811,2.75e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74375713521564,0,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.17587489739202,1.98485136139341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59412430396938,2.60024098414608,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,3.1903178123646,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:167247103..167247112,+ | |||
}} |
Latest revision as of 12:43, 30 July 2015
Short description: | p@chr5:167247103..167247112, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167247103..167247112, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.79e-54 | 3 |
general ecto-epithelial cell | 4.28e-46 | 14 |
sebum secreting cell | 1.89e-37 | 2 |
epithelial cell of sweat gland | 1.89e-37 | 2 |
epithelial cell of skin gland | 1.89e-37 | 2 |
acinar cell of sebaceous gland | 1.89e-37 | 2 |
gingival epithelial cell | 8.95e-25 | 3 |
ecto-epithelial cell | 5.25e-19 | 34 |
epidermal cell | 6.02e-19 | 9 |
acinar cell | 1.21e-15 | 5 |
protein secreting cell | 3.34e-13 | 6 |
glandular epithelial cell | 4.09e-09 | 9 |
ectodermal cell | 1.16e-08 | 72 |
duct epithelial cell | 2.47e-07 | 3 |
branched duct epithelial cell | 2.47e-07 | 3 |
tracheal epithelial cell | 2.47e-07 | 3 |
tracheoblast | 2.47e-07 | 3 |
endo-epithelial cell | 3.31e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.31e-40 | 4 |
splanchnocranium | 1.31e-40 | 4 |
skin gland | 1.89e-37 | 2 |
epidermis gland | 1.89e-37 | 2 |
gland of integumental system | 1.89e-37 | 2 |
sebaceous gland | 1.89e-37 | 2 |
skin sebaceous gland | 1.89e-37 | 2 |
sweat gland | 1.89e-37 | 2 |
sweat gland placode | 1.89e-37 | 2 |
sebaceous gland placode | 1.89e-37 | 2 |
primary subdivision of cranial skeletal system | 1.15e-32 | 5 |
protuberance | 2.32e-27 | 6 |
pharyngeal arch | 2.32e-27 | 6 |
embryonic head | 2.32e-27 | 6 |
gingival epithelium | 8.95e-25 | 3 |
cranial skeletal system | 2.88e-15 | 11 |
axial skeletal system | 3.86e-12 | 14 |
skin epidermis | 1.23e-11 | 15 |
outer epithelium | 1.23e-11 | 15 |
enveloping layer of ectoderm | 1.23e-11 | 15 |
surface structure | 3.35e-11 | 99 |
subdivision of skeletal system | 1.06e-10 | 16 |
epithelium of mucosa | 6.34e-10 | 8 |
gingiva | 6.34e-10 | 8 |
pharyngeal arch system | 1.40e-09 | 18 |
head | 4.57e-08 | 56 |
anterior region of body | 2.75e-07 | 62 |
craniocervical region | 2.75e-07 | 62 |