FFCP PHASE1:Hg19::chr5:176867600..176867609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:176867600..176867609,+ | |||
|coexpression_cluster_id=C673 | |coexpression_cluster_id=C673 | ||
|description=CAGE_peak_at_chr5:176867600..176867609,+ | |description=CAGE_peak_at_chr5:176867600..176867609,+ | ||
Latest revision as of 13:37, 30 July 2015
| Short description: | p@chr5:176867600..176867609, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr5:176867600..176867609, + |
| Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p@chr5:176867600..176867609+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD4-positive, alpha-beta T cell | 1.79e-75 | 6 |
| mature alpha-beta T cell | 1.59e-39 | 18 |
| alpha-beta T cell | 1.59e-39 | 18 |
| immature T cell | 1.59e-39 | 18 |
| mature T cell | 1.59e-39 | 18 |
| immature alpha-beta T cell | 1.59e-39 | 18 |
| natural killer cell | 3.86e-38 | 3 |
| pro-NK cell | 3.86e-38 | 3 |
| CD4-positive, alpha-beta thymocyte | 3.16e-29 | 1 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 3.16e-29 | 1 |
Showing 1 to 10 of 39 entries
| Ontology term | p-value | n |
|---|---|---|
| thymus | 2.43e-08 | 4 |
| hemolymphoid system gland | 2.43e-08 | 4 |
| thymic region | 2.43e-08 | 4 |
| pharyngeal gland | 2.43e-08 | 4 |
| thymus primordium | 2.43e-08 | 4 |
Showing 1 to 5 of 5 entries
