FFCP PHASE1:Hg19::chr5:28930096..28930106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:28930096..28930106,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr5:28930096..28930106,+ | |description=CAGE_peak_at_chr5:28930096..28930106,+ | ||
|id=chr5:28930096..28930106,+ | |id=chr5:28930096..28930106,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.57e-18!5;CL:0000066!3.42e-14!254;CL:0000039!1.72e-12!7;CL:0000586!1.72e-12!7 | |ontology_enrichment_celltype=CL:0002322!1.57e-18!5;CL:0000066!3.42e-14!254;CL:0000039!1.72e-12!7;CL:0000586!1.72e-12!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.56e-70;5!CL:0002321;1.66e-23;15!CL:0000540;2.73e-22;6!CL:0000404;2.73e-22;6!CL:0000039;5.75e-19;7!CL:0000586;5.75e-19;7!CL:0000148;1.94e-13;10!CL:0000147;9.10e-10;14!CL:0000710;5.39e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.39e-70,5;CL:0000540,2.45e-22,6;CL:0000031,2.45e-22,6;CL:0000404,2.45e-22,6;CL:0000039,6.30e-19,7;CL:0000586,6.30e-19,7;CL:0000047,6.31e-17,8;CL:0000148,1.90e-13,10;CL:0000541,1.90e-13,10;CL:0000147,8.96e-10,14;CL:0000133,3.30e-08,59;CL:0000710,5.34e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;2.73e-22;6!UBERON:0009117;1.78e-13;10!UBERON:0005564;1.78e-13;10 | |||
|ontology_enrichment_disease=DOID:305!5.23e-34!106;DOID:0050687!6.55e-26!143;DOID:162!9.45e-16!235;DOID:14566!3.26e-15!239;DOID:299!2.75e-09!25;DOID:3095!6.89e-09!22;DOID:2994!6.89e-09!22;DOID:3493!1.07e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.14e-10;22!DOID:2994;1.14e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.20e-10,22;DOID:2994,1.20e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.47e-09!9;UBERON:0000473!1.74e-07!8 | |ontology_enrichment_uberon=UBERON:0001737!8.47e-09!9;UBERON:0000473!1.74e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.11e-16;8!UBERON:0003135;2.63e-12;11!UBERON:0000922;2.03e-10;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.20e-16,8;UBERON:0003135,2.79e-12,11 | |||
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| ||
|short_description=p@chr5:28930096..28930106,+ | |short_description=p@chr5:28930096..28930106,+ | ||
}} | }} |
Latest revision as of 14:15, 30 July 2015
Short description: | p@chr5:28930096..28930106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:28930096..28930106, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.39e-70 | 5 |
neuron | 2.45e-22 | 6 |
neuroblast | 2.45e-22 | 6 |
electrically signaling cell | 2.45e-22 | 6 |
germ line cell | 6.30e-19 | 7 |
germ cell | 6.30e-19 | 7 |
neuronal stem cell | 6.31e-17 | 8 |
melanocyte | 1.90e-13 | 10 |
melanoblast | 1.90e-13 | 10 |
pigment cell | 8.96e-10 | 14 |
neurectodermal cell | 3.30e-08 | 59 |
neurecto-epithelial cell | 5.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 1.20e-16 | 8 |
male reproductive organ | 2.79e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.20e-10 | 22 |
germ cell cancer | 1.20e-10 | 22 |