FFCP PHASE1:Hg19::chr5:39424855..39424860,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:39424855..39424860,- | |||
|description=CAGE_peak_at_chr5:39424855..39424860,- | |description=CAGE_peak_at_chr5:39424855..39424860,- | ||
|id=chr5:39424855..39424860,- | |id=chr5:39424855..39424860,- | ||
|ontology_enrichment_celltype=CL:0000569!8.64e-10!4;CL:0000011!8.64e-10!4 | |ontology_enrichment_celltype=CL:0000569!8.64e-10!4;CL:0000011!8.64e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.70e-22;23 | |ontology_enrichment_celltype_v019=CL:0002620;8.70e-22;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.70e-22,23;CL:0000057,2.18e-09,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.21e-12!14 | |ontology_enrichment_disease=DOID:2394!6.21e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:17;9.55e-17;5!DOID:450;9.55e-17;5!DOID:66;9.55e-17;5!DOID:423;9.55e-17;5!DOID:0080000;9.55e-17;5!DOID:11722;9.55e-17;5!DOID:3307;3.89e-11;2 | |ontology_enrichment_disease_v019=DOID:17;9.55e-17;5!DOID:450;9.55e-17;5!DOID:66;9.55e-17;5!DOID:423;9.55e-17;5!DOID:0080000;9.55e-17;5!DOID:11722;9.55e-17;5!DOID:3307;3.89e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:17,9.55e-17,5;DOID:450,9.55e-17,5;DOID:66,9.55e-17,5;DOID:423,9.55e-17,5;DOID:0080000,9.55e-17,5;DOID:11722,9.55e-17,5;DOID:3307,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000991!3.91e-08!21;UBERON:0009196!3.91e-08!21;UBERON:0009117!3.91e-08!21;UBERON:0005564!3.91e-08!21;UBERON:0004176!1.13e-07!22;UBERON:0000992!2.71e-07!13 | |ontology_enrichment_uberon=UBERON:0000991!3.91e-08!21;UBERON:0009196!3.91e-08!21;UBERON:0009117!3.91e-08!21;UBERON:0005564!3.91e-08!21;UBERON:0004176!1.13e-07!22;UBERON:0000992!2.71e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.98e-21;1!UBERON:0005208;6.98e-21;1!UBERON:0004145;6.98e-21;1!UBERON:0005946;6.98e-21;1!UBERON:0005965;6.98e-21;1!UBERON:0002078;6.98e-21;1!UBERON:0002081;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0002097;4.95e-10;41!UBERON:0002199;7.07e-08;46!UBERON:0002416;7.07e-08;46!UBERON:0003978;7.50e-08;3!UBERON:0004151;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0003102;2.99e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002134;6.98e-21;1!UBERON:0005208;6.98e-21;1!UBERON:0004145;6.98e-21;1!UBERON:0005946;6.98e-21;1!UBERON:0005965;6.98e-21;1!UBERON:0002078;6.98e-21;1!UBERON:0002081;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0002097;4.95e-10;41!UBERON:0002199;7.07e-08;46!UBERON:0002416;7.07e-08;46!UBERON:0003978;7.50e-08;3!UBERON:0004151;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0003102;2.99e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.31e-21,1;UBERON:0005208,6.31e-21,1;UBERON:0005946,6.31e-21,1;UBERON:0005965,6.31e-21,1;UBERON:0002078,6.31e-21,1;UBERON:0004797,2.51e-12,7;UBERON:0002097,2.63e-12,41;UBERON:0002081,3.70e-11,2;UBERON:0002133,3.70e-11,2;UBERON:0010227,3.70e-11,2;UBERON:0002199,5.55e-11,46;UBERON:0002416,5.55e-11,46;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0004151,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0004145,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,3.44203944898576,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.4351170855109,0,0,2.70081986475962,0.103052529238439,6.1833729610951,0,0.168776332241266,0,3.02920529092937,0.0920498986422993,0,3.90510551768276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,2.51849877464512,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.934853239388898,0,0.378806010550178,0.50313580350515,0,0.228840068396924,0.756154618816195,0.310874401165561,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,0,1.05180326298053,0.761610424337591,0.406870733204662,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,3.44203944898576,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,1.4351170855109,0,0,2.70081986475962,0.103052529238439,6.1833729610951,0,0.168776332241266,0,3.02920529092937,0.0920498986422993,0,3.90510551768276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,2.51849877464512,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.934853239388898,0,0.378806010550178,0.50313580350515,0,0.228840068396924,0.756154618816195,0.310874401165561,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,0,1.05180326298053,0.761610424337591,0.406870733204662,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr5:39424855..39424860,- | |short_description=p@chr5:39424855..39424860,- | ||
}} | }} |
Latest revision as of 14:45, 30 July 2015
Short description: | p@chr5:39424855..39424860, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:39424855..39424860, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.70e-22 | 23 |
fibroblast | 2.18e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 6.31e-21 | 1 |
right atrium valve | 6.31e-21 | 1 |
outflow tract of atrium | 6.31e-21 | 1 |
outflow part of right atrium | 6.31e-21 | 1 |
right cardiac atrium | 6.31e-21 | 1 |
blood vessel layer | 2.51e-12 | 7 |
skin of body | 2.63e-12 | 41 |
cardiac atrium | 3.70e-11 | 2 |
atrioventricular valve | 3.70e-11 | 2 |
future cardiac atrium | 3.70e-11 | 2 |
integument | 5.55e-11 | 46 |
integumental system | 5.55e-11 | 46 |
valve | 7.26e-08 | 3 |
cardiac mesenchyme | 7.26e-08 | 3 |
cardiac chamber | 7.26e-08 | 3 |
cardial valve | 7.26e-08 | 3 |
tunica intima | 7.26e-08 | 3 |
heart layer | 7.26e-08 | 3 |
outflow tract | 7.26e-08 | 3 |
endocardium | 7.26e-08 | 3 |
endocardial cushion | 7.26e-08 | 3 |
presumptive endocardium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.55e-17 | 5 |
myotonic disease | 9.55e-17 | 5 |
muscle tissue disease | 9.55e-17 | 5 |
myopathy | 9.55e-17 | 5 |
muscular disease | 9.55e-17 | 5 |
myotonic dystrophy | 9.55e-17 | 5 |
teratoma | 3.35e-11 | 2 |