FFCP PHASE1:Hg19::chr6:112538096..112538101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:112538096..112538101,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr6:112538096..112538101,+ | |description=CAGE_peak_at_chr6:112538096..112538101,+ | ||
|id=chr6:112538096..112538101,+ | |id=chr6:112538096..112538101,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.04e-37!24;CL:0000115!5.89e-28!35;CL:0000071!8.08e-28!18;CL:0002546!8.08e-28!18;CL:0000222!1.44e-26!119;CL:0000213!1.17e-24!57;CL:0000215!1.17e-24!57;CL:0002078!1.47e-20!44;CL:1000413!1.56e-17!9;CL:0002544!2.30e-12!6;CL:0005020!1.02e-10!6;CL:0002138!1.02e-10!6;CL:0005022!1.02e-10!6;CL:0000076!1.16e-10!62;CL:0000220!3.58e-10!246;CL:0002321!5.71e-10!248;CL:0000144!3.33e-09!625;CL:0002543!1.15e-07!6;CL:0002371!1.30e-07!591;CL:0000680!6.99e-07!57;CL:0000056!6.99e-07!57;CL:0000355!6.99e-07!57;CL:0000548!9.79e-07!679;CL:0000004!9.79e-07!679;CL:0000255!9.79e-07!679 | |ontology_enrichment_celltype=CL:0002139!5.04e-37!24;CL:0000115!5.89e-28!35;CL:0000071!8.08e-28!18;CL:0002546!8.08e-28!18;CL:0000222!1.44e-26!119;CL:0000213!1.17e-24!57;CL:0000215!1.17e-24!57;CL:0002078!1.47e-20!44;CL:1000413!1.56e-17!9;CL:0002544!2.30e-12!6;CL:0005020!1.02e-10!6;CL:0002138!1.02e-10!6;CL:0005022!1.02e-10!6;CL:0000076!1.16e-10!62;CL:0000220!3.58e-10!246;CL:0002321!5.71e-10!248;CL:0000144!3.33e-09!625;CL:0002543!1.15e-07!6;CL:0002371!1.30e-07!591;CL:0000680!6.99e-07!57;CL:0000056!6.99e-07!57;CL:0000355!6.99e-07!57;CL:0000548!9.79e-07!679;CL:0000004!9.79e-07!679;CL:0000255!9.79e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.99e-49;18!CL:0002139;3.98e-44;24!CL:0002544;8.65e-38;6!CL:0000115;1.35e-36;36!CL:1000413;4.94e-36;9!CL:0002078;9.13e-21;45!CL:0000213;5.95e-20;58!CL:0000215;5.95e-20;58!CL:0002543;1.29e-14;6!CL:0000136;9.08e-12;13!CL:0000076;1.93e-10;63!CL:0002188;5.04e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.26e-49,18;CL:0002546,3.26e-49,18;CL:0002139,3.74e-44,24;CL:0000115,2.23e-40,36;CL:0002544,6.38e-38,6;CL:1000413,3.88e-36,9;CL:0002078,6.69e-32,45;CL:0000213,2.97e-28,58;CL:0000215,2.97e-28,58;CL:0000222,1.72e-16,121;CL:0000076,8.70e-16,63;CL:0002543,1.32e-14,6;CL:0000136,3.24e-10,15;CL:0002321,1.06e-08,250;CL:0002188,5.04e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.99e-49;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.61e-30!69;UBERON:0001986!8.08e-28!18;UBERON:0004638!8.08e-28!18;UBERON:0004852!8.08e-28!18;UBERON:0002049!1.51e-24!79;UBERON:0007798!1.51e-24!79;UBERON:0001981!1.94e-24!60;UBERON:0007500!1.94e-24!60;UBERON:0004537!1.94e-24!60;UBERON:0006965!1.94e-24!60;UBERON:0000487!9.27e-22!22;UBERON:0001637!6.19e-21!42;UBERON:0003509!6.19e-21!42;UBERON:0004572!6.19e-21!42;UBERON:0004535!2.47e-19!110;UBERON:0004872!3.73e-19!84;UBERON:0006914!1.68e-18!25;UBERON:0001009!1.78e-18!113;UBERON:0003915!1.56e-17!9;UBERON:0004700!1.56e-17!9;UBERON:0001917!1.56e-17!9;UBERON:0003914!3.84e-16!118;UBERON:0004573!1.12e-15!33;UBERON:0004571!1.12e-15!33;UBERON:0000490!6.80e-11!138;UBERON:0000947!6.90e-09!21;UBERON:0010191!6.90e-09!21;UBERON:0004111!2.77e-08!241;UBERON:0001473!8.40e-08!8;UBERON:0004536!8.40e-08!8;UBERON:0006558!8.40e-08!8;UBERON:0000025!2.56e-07!194;UBERON:0003081!2.57e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.99e-49;18!UBERON:0001986;3.99e-49;18!UBERON:0004852;3.99e-49;18!UBERON:0000487;5.98e-40;22!UBERON:0003915;4.94e-36;9!UBERON:0004700;4.94e-36;9!UBERON:0001917;4.94e-36;9!UBERON:0006914;5.43e-35;25!UBERON:0000490;3.07e-26;33!UBERON:0007500;1.59e-14;56!UBERON:0001981;1.59e-14;56!UBERON:0004537;1.59e-14;56!UBERON:0004573;1.20e-12;33!UBERON:0004571;1.20e-12;33!UBERON:0000055;7.39e-12;65!UBERON:0001637;1.18e-11;42!UBERON:0003509;1.18e-11;42!UBERON:0004572;1.18e-11;42!UBERON:0000947;9.38e-11;21!UBERON:0010191;9.38e-11;21!UBERON:0001638;6.38e-10;9!UBERON:0003920;6.38e-10;9!UBERON:0004582;6.38e-10;9!UBERON:0000025;1.13e-09;93!UBERON:0001009;4.48e-08;112!UBERON:0003914;5.78e-08;74!UBERON:0004535;9.30e-08;109!UBERON:0002049;7.46e-07;75!UBERON:0007798;7.46e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.26e-49,18;UBERON:0001986,3.26e-49,18;UBERON:0004852,3.26e-49,18;UBERON:0000487,5.07e-40,22;UBERON:0003915,3.88e-36,9;UBERON:0004700,3.88e-36,9;UBERON:0001917,3.88e-36,9;UBERON:0006914,4.70e-35,25;UBERON:0000055,1.96e-20,68;UBERON:0007500,2.80e-20,59;UBERON:0001981,2.80e-20,59;UBERON:0004537,2.80e-20,59;UBERON:0006965,2.80e-20,59;UBERON:0002049,1.52e-17,78;UBERON:0007798,1.52e-17,78;UBERON:0004872,7.37e-14,83;UBERON:0003914,7.20e-13,117;UBERON:0001637,7.36e-13,42;UBERON:0003509,7.36e-13,42;UBERON:0004572,7.36e-13,42;UBERON:0004573,9.21e-13,33;UBERON:0004571,9.21e-13,33;UBERON:0004535,6.02e-12,109;UBERON:0001009,1.44e-11,112;UBERON:0000947,8.63e-11,21;UBERON:0010191,8.63e-11,21;UBERON:0001638,6.48e-10,9;UBERON:0003920,6.48e-10,9;UBERON:0004582,6.48e-10,9;UBERON:0000490,2.96e-08,148;UBERON:0000025,7.12e-07,192 | |||
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|short_description=p@chr6:112538096..112538101,+ | |short_description=p@chr6:112538096..112538101,+ | ||
}} | }} |
Latest revision as of 18:26, 30 July 2015
Short description: | p@chr6:112538096..112538101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:112538096..112538101, + |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.26e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.26e-49 | 18 |
endothelial cell of vascular tree | 3.74e-44 | 24 |
endothelial cell | 2.23e-40 | 36 |
aortic endothelial cell | 6.38e-38 | 6 |
endothelial cell of artery | 3.88e-36 | 9 |
meso-epithelial cell | 6.69e-32 | 45 |
lining cell | 2.97e-28 | 58 |
barrier cell | 2.97e-28 | 58 |
mesodermal cell | 1.72e-16 | 121 |
squamous epithelial cell | 8.70e-16 | 63 |
vein endothelial cell | 1.32e-14 | 6 |
fat cell | 3.24e-10 | 15 |
embryonic cell | 1.06e-08 | 250 |
glomerular endothelial cell | 5.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.26e-49 | 18 |
endothelium | 3.26e-49 | 18 |
cardiovascular system endothelium | 3.26e-49 | 18 |
simple squamous epithelium | 5.07e-40 | 22 |
endothelial tube | 3.88e-36 | 9 |
arterial system endothelium | 3.88e-36 | 9 |
endothelium of artery | 3.88e-36 | 9 |
squamous epithelium | 4.70e-35 | 25 |
vessel | 1.96e-20 | 68 |
epithelial tube open at both ends | 2.80e-20 | 59 |
blood vessel | 2.80e-20 | 59 |
blood vasculature | 2.80e-20 | 59 |
vascular cord | 2.80e-20 | 59 |
vasculature | 1.52e-17 | 78 |
vascular system | 1.52e-17 | 78 |
splanchnic layer of lateral plate mesoderm | 7.37e-14 | 83 |
epithelial tube | 7.20e-13 | 117 |
artery | 7.36e-13 | 42 |
arterial blood vessel | 7.36e-13 | 42 |
arterial system | 7.36e-13 | 42 |
systemic artery | 9.21e-13 | 33 |
systemic arterial system | 9.21e-13 | 33 |
cardiovascular system | 6.02e-12 | 109 |
circulatory system | 1.44e-11 | 112 |
aorta | 8.63e-11 | 21 |
aortic system | 8.63e-11 | 21 |
vein | 6.48e-10 | 9 |
venous blood vessel | 6.48e-10 | 9 |
venous system | 6.48e-10 | 9 |
unilaminar epithelium | 2.96e-08 | 148 |
tube | 7.12e-07 | 192 |