FFCP PHASE1:Hg19::chr6:138417550..138417583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138417550..138417583,- | |||
|coexpression_cluster_id=C748 | |||
|description=CAGE_peak_at_chr6:138417550..138417583,- | |description=CAGE_peak_at_chr6:138417550..138417583,- | ||
|id=chr6:138417550..138417583,- | |id=chr6:138417550..138417583,- | ||
|ontology_enrichment_celltype=CL:0000066!8.16e-19!254;CL:0002076!4.62e-15!43;CL:0000223!1.98e-12!59;CL:0002251!1.43e-09!21 | |ontology_enrichment_celltype=CL:0000066!8.16e-19!254;CL:0002076!4.62e-15!43;CL:0000223!1.98e-12!59;CL:0002251!1.43e-09!21 | ||
|ontology_enrichment_celltype_v019=CL:0002251;7.59e-17;20!CL:0002076;8.60e-17;42!CL:0002623;1.49e-10;3!CL:0000622;1.84e-10;5!CL:0002621;1.89e-10;3!CL:0002231;3.07e-10;3!CL:0002159;8.34e-10;14!CL:0000154;1.03e-08;6!CL:0000244;9.05e-08;4!CL:0000731;9.05e-08;4!CL:0000575;3.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.11e-19,42;CL:0002251,9.77e-17,20;CL:0000223,1.56e-14,58;CL:0002623,1.43e-10,3;CL:0000622,1.90e-10,5;CL:0002621,2.69e-10,3;CL:0002231,4.03e-10,3;CL:0002159,6.98e-10,14;CL:0000154,1.05e-08,6;CL:0000066,1.27e-08,253;CL:0000244,7.65e-08,4;CL:0000731,7.65e-08,4;CL:0000575,2.34e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.05e-09;58 | |||
|ontology_enrichment_disease=DOID:305!3.52e-11!106;DOID:0050687!3.69e-11!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.26e-16!169;UBERON:0000925!9.26e-16!169;UBERON:0006595!9.26e-16!169;UBERON:0001007!2.88e-11!155;UBERON:0001555!2.88e-11!155;UBERON:0007026!2.88e-11!155;UBERON:0000161!2.98e-11!35;UBERON:0001004!7.05e-10!72;UBERON:0004921!1.03e-08!129;UBERON:0004185!1.03e-08!129;UBERON:0000166!1.28e-08!21;UBERON:0000077!3.37e-08!130;UBERON:0003102!2.40e-07!95;UBERON:0000165!2.43e-07!28;UBERON:0000930!2.43e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.72e-11;28!UBERON:0001949;1.89e-10;3!UBERON:0000161;1.60e-09;19!UBERON:0000166;1.60e-09;19!UBERON:0000486;4.19e-09;12!UBERON:0003729;4.46e-08;13!UBERON:0005631;5.77e-08;10!UBERON:0000158;5.77e-08;10!UBERON:0001041;8.35e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,8.64e-13,22;UBERON:0000161,4.11e-12,36;UBERON:0003102,4.75e-12,99;UBERON:0000165,5.00e-11,29;UBERON:0000930,5.00e-11,29;UBERON:0000033,1.50e-10,56;UBERON:0000153,1.72e-10,62;UBERON:0007811,1.72e-10,62;UBERON:0001949,2.69e-10,3;UBERON:0003729,4.42e-08,13;UBERON:0001444,5.01e-08,49;UBERON:0004119,2.91e-07,160;UBERON:0000925,2.91e-07,160;UBERON:0006595,2.91e-07,160;UBERON:0001004,3.85e-07,74 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.263504357079378,0.0654895377488563,1.45718115317017,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,3.48875241714027,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0.300476117813194,0,0,0.640672166455702,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,5.60456474173561,4.36393792945335,1.14721838155602,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0.354920400119532,0,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0.943819157121151,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,3.40225884766739,0,2.01057944823262,1.20364978706088,0,0,0,0.34779121492523,0,0,0,0.570762456703795,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,1.34385702559088,1.55952606966625,0.806026704325635,0.290633938513962,1.15014803749563,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.713715955188647,0.630809660135739,0.468565659970853,0,2.27407504055985,0,0,0,0.173767228936166,0.391602314925481,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,1.20859449591622,3.00759705454927,3.77532054637175,0.114814448164607,0.728364672026868,0.917870904715969,0.902399225814824,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0.9273691048295,0.0915694648183434,0,0,1.30012049207304,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0,0,0.170453254832202,0,2.97512847649761,1.53752053892085,0.638063562472921,2.32662895967765,0,0.62962469366128,0,0,0,0,0,0.572499546967965,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0.54907405947211,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,0.424216295861138,0,0,0,2.19225442626881,0.578775534266688,0,0,0,0,0.286822704408103,0.294747123039363,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0.865999014529609,0,0,0.847294206991012,3.01353760869861,1.68471475667626,3.54744122829341,0.918893600827838,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0.111443384277478,0.852408440419239,3.58116727106535,2.07875276582847,7.37185685038157,0,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0,0.358042349351218,0,0.690503839458535,0,0,0,0.185536196323703,0,1.30213880542617,0.0874599999961957,0,1.93448862085349,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0.975966209950223,1.69290568708354,0.113942055847001,0.46112780877612,1.34636466614658,0.217294743844016,1.91400695839152,0.366390373607449,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0.622129148383483,0,0,0,0,0,0.277349346026277,0.867798691675654,0.587954384486266,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0.164230914106418,8.24406640151565,0.353024506766001,0.677942222341597,0.411125773940253,0,0,0.391102765469606,0.160317640503067,0.640358984218058,0.599428828746391,1.00863292007874,0,0.686379991447858,0.432164393964449,0.372757606696298,2.59263438078475,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0.998395002494955,0.858452096273142,0.223171457441873,0.134366944973453,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0.321506296930038,1.37539436597234,1.24632101408756,0,0,0,5.36695500158826,0.2364171218975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| ||
|short_description=p@chr6:138417550..138417583,- | |short_description=p@chr6:138417550..138417583,- | ||
}} | }} |
Latest revision as of 20:06, 30 July 2015
Short description: | p@chr6:138417550..138417583, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138417550..138417583, - |
Coexpression cluster: | C748_amniotic_keratoacanthoma_salivary_Keratinocyte_maxillary_Corneal_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.11e-19 | 42 |
epithelial cell of alimentary canal | 9.77e-17 | 20 |
endodermal cell | 1.56e-14 | 58 |
acinar cell of salivary gland | 1.43e-10 | 3 |
acinar cell | 1.90e-10 | 5 |
gingival epithelial cell | 2.69e-10 | 3 |
epithelial cell of prostate | 4.03e-10 | 3 |
general ecto-epithelial cell | 6.98e-10 | 14 |
protein secreting cell | 1.05e-08 | 6 |
epithelial cell | 1.27e-08 | 253 |
transitional epithelial cell | 7.65e-08 | 4 |
urothelial cell | 7.65e-08 | 4 |
corneal epithelial cell | 2.34e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 8.64e-13 | 22 |
orifice | 4.11e-12 | 36 |
surface structure | 4.75e-12 | 99 |
mouth | 5.00e-11 | 29 |
stomodeum | 5.00e-11 | 29 |
head | 1.50e-10 | 56 |
anterior region of body | 1.72e-10 | 62 |
craniocervical region | 1.72e-10 | 62 |
gingival epithelium | 2.69e-10 | 3 |
mouth mucosa | 4.42e-08 | 13 |
subdivision of head | 5.01e-08 | 49 |
endoderm-derived structure | 2.91e-07 | 160 |
endoderm | 2.91e-07 | 160 |
presumptive endoderm | 2.91e-07 | 160 |
respiratory system | 3.85e-07 | 74 |