FFCP PHASE1:Hg19::chr6:168216612..168216629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:168216612..168216629,+ | |||
|description=CAGE_peak_at_chr6:168216612..168216629,+ | |description=CAGE_peak_at_chr6:168216612..168216629,+ | ||
|id=chr6:168216612..168216629,+ | |id=chr6:168216612..168216629,+ | ||
|ontology_enrichment_celltype=CL:1000415!1.34e-08!2 | |ontology_enrichment_celltype=CL:1000415!1.34e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.07e-22;2!CL:0002563;2.20e-12;4!CL:0002149;2.81e-08;6!CL:0002255;2.81e-08;6!CL:0002253;5.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,8.55e-23,2;CL:0002563,2.20e-12,4;CL:0002149,3.02e-08,6;CL:0002255,3.02e-08,6;CL:0002253,4.83e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.92e-15!25;DOID:3119!3.30e-12!14;DOID:0050687!9.18e-12!143;DOID:14566!1.61e-11!239;DOID:162!4.57e-11!235;DOID:305!4.72e-11!106;DOID:0050686!3.59e-08!137;DOID:154!5.10e-08!2;DOID:4236!5.10e-08!2;DOID:1036!2.63e-07!8 | |ontology_enrichment_disease=DOID:299!1.92e-15!25;DOID:3119!3.30e-12!14;DOID:0050687!9.18e-12!143;DOID:14566!1.61e-11!239;DOID:162!4.57e-11!235;DOID:305!4.72e-11!106;DOID:0050686!3.59e-08!137;DOID:154!5.10e-08!2;DOID:4236!5.10e-08!2;DOID:1036!2.63e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:299;1.45e-15;25!DOID:3119;4.03e-13;14!DOID:1799;3.08e-12;1!DOID:10165;3.08e-12;1!DOID:1798;3.08e-12;1!DOID:5093;7.52e-12;4!DOID:1612;7.52e-12;4!DOID:3001;2.81e-08;6!DOID:305;3.35e-08;106!DOID:4468;6.24e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.32e-15,25;DOID:305,2.41e-13,106;DOID:0050687,3.16e-13,143;DOID:3119,3.50e-13,14;DOID:1799,4.81e-12,1;DOID:10165,4.81e-12,1;DOID:1798,4.81e-12,1;DOID:5093,6.03e-12,4;DOID:1612,6.03e-12,4;DOID:0050686,8.06e-10,137;DOID:162,8.08e-10,235;DOID:14566,1.44e-09,239;DOID:3001,3.02e-08,6;DOID:4468,6.07e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.17e-08!7;UBERON:0001173!1.17e-08!7;UBERON:0004912!1.17e-08!7 | |ontology_enrichment_uberon=UBERON:0002294!1.17e-08!7;UBERON:0001173!1.17e-08!7;UBERON:0004912!1.17e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.77e-15;3!UBERON:0002294;9.56e-15;7!UBERON:0001173;9.56e-15;7!UBERON:0001242;2.20e-12;4!UBERON:0001262;2.20e-12;4!UBERON:0004786;2.20e-12;4!UBERON:0004808;2.20e-12;4!UBERON:0001277;2.20e-12;4!UBERON:0000485;1.90e-07;7!UBERON:0003929;1.90e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.53e-15,3;UBERON:0006242,1.53e-15,3;UBERON:0001242,2.20e-12,4;UBERON:0001262,2.20e-12,4;UBERON:0004786,2.20e-12,4;UBERON:0004808,2.20e-12,4;UBERON:0001277,2.20e-12,4;UBERON:0002294,1.18e-11,9;UBERON:0001173,1.18e-11,9;UBERON:0004912,1.18e-11,9;UBERON:0003929,4.21e-07,54 | |||
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| ||
|short_description=p@chr6:168216612..168216629,+ | |short_description=p@chr6:168216612..168216629,+ | ||
}} | }} |
Latest revision as of 22:11, 30 July 2015
Short description: | p@chr6:168216612..168216629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:168216612..168216629, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 8.55e-23 | 2 |
intestinal epithelial cell | 2.20e-12 | 4 |
epithelial cell of uterus | 3.02e-08 | 6 |
stromal cell of endometrium | 3.02e-08 | 6 |
epithelial cell of large intestine | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.53e-15 | 3 |
gall bladder primordium | 1.53e-15 | 3 |
intestinal mucosa | 2.20e-12 | 4 |
wall of intestine | 2.20e-12 | 4 |
gastrointestinal system mucosa | 2.20e-12 | 4 |
gastrointestinal system epithelium | 2.20e-12 | 4 |
intestinal epithelium | 2.20e-12 | 4 |
biliary system | 1.18e-11 | 9 |
biliary tree | 1.18e-11 | 9 |
biliary bud | 1.18e-11 | 9 |
gut epithelium | 4.21e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.32e-15 | 25 |
carcinoma | 2.41e-13 | 106 |
cell type cancer | 3.16e-13 | 143 |
gastrointestinal system cancer | 3.50e-13 | 14 |
islet cell tumor | 4.81e-12 | 1 |
endocrine pancreas cancer | 4.81e-12 | 1 |
pancreatic endocrine carcinoma | 4.81e-12 | 1 |
thoracic cancer | 6.03e-12 | 4 |
breast cancer | 6.03e-12 | 4 |
organ system cancer | 8.06e-10 | 137 |
cancer | 8.08e-10 | 235 |
disease of cellular proliferation | 1.44e-09 | 239 |
female reproductive endometrioid cancer | 3.02e-08 | 6 |
clear cell adenocarcinoma | 6.07e-07 | 2 |