FFCP PHASE1:Hg19::chr6:169617543..169617560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:169617543..169617560,- | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_at_chr6:169617543..169617560,- | |description=CAGE_peak_at_chr6:169617543..169617560,- | ||
|id=chr6:169617543..169617560,- | |id=chr6:169617543..169617560,- | ||
|ontology_enrichment_celltype=CL:0000055!3.09e-24!180;CL:0000057!9.65e-22!75;CL:0000723!1.01e-10!436;CL:0000048!1.76e-10!430;CL:0000034!3.77e-10!444;CL:0000183!4.12e-10!59;CL:0002334!6.03e-10!12;CL:0000187!9.89e-10!54;CL:0000680!1.91e-09!57;CL:0000056!1.91e-09!57;CL:0000355!1.91e-09!57;CL:0000393!2.24e-08!60;CL:0000211!2.24e-08!60;CL:0000192!3.88e-08!42;CL:0000514!3.88e-08!42;CL:0000144!2.09e-07!625;CL:0002620!2.21e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.09e-24!180;CL:0000057!9.65e-22!75;CL:0000723!1.01e-10!436;CL:0000048!1.76e-10!430;CL:0000034!3.77e-10!444;CL:0000183!4.12e-10!59;CL:0002334!6.03e-10!12;CL:0000187!9.89e-10!54;CL:0000680!1.91e-09!57;CL:0000056!1.91e-09!57;CL:0000355!1.91e-09!57;CL:0000393!2.24e-08!60;CL:0000211!2.24e-08!60;CL:0000192!3.88e-08!42;CL:0000514!3.88e-08!42;CL:0000144!2.09e-07!625;CL:0002620!2.21e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.17e-15;55!CL:0002334;4.40e-14;12!CL:0000048;2.24e-13;58!CL:0000723;6.73e-12;61!CL:1000306;1.51e-10;4!CL:0002547;1.51e-10;4!CL:0000034;1.76e-10;69!CL:0002579;1.05e-09;3!CL:0000135;1.49e-09;3!CL:0000388;1.49e-09;3!CL:0002615;2.41e-09;3!CL:0002580;3.00e-09;3!CL:0000136;1.83e-07;13!CL:0002617;7.65e-07;2!CL:0002320;9.75e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.30e-14,12;CL:0000057,7.11e-14,76;CL:0000723,4.73e-13,433;CL:0000048,9.85e-13,427;CL:0000034,1.59e-12,441;CL:0000134,2.88e-12,354;CL:0002320,9.41e-12,361;CL:1000306,1.72e-10,4;CL:0002547,1.72e-10,4;CL:0000219,5.96e-10,386;CL:0002579,1.21e-09,3;CL:0000135,1.36e-09,3;CL:0000388,1.36e-09,3;CL:0002580,2.17e-09,3;CL:0002615,3.18e-09,3;CL:0000136,2.82e-08,15;CL:0002617,7.26e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.96e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.47e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.97e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.86e-09!45;UBERON:0002416!6.86e-09!45;UBERON:0000914!2.86e-08!83;UBERON:0002329!2.86e-08!83;UBERON:0003077!2.86e-08!83;UBERON:0003059!2.86e-08!83;UBERON:0007282!2.86e-08!83;UBERON:0009618!2.86e-08!83;UBERON:0007285!2.86e-08!83;UBERON:0002097!3.34e-08!40;UBERON:0001134!3.47e-08!61;UBERON:0002036!3.47e-08!61;UBERON:0003082!3.47e-08!61;UBERON:0003688!6.65e-08!6;UBERON:0002358!6.65e-08!6;UBERON:0003684!6.65e-08!6;UBERON:0001178!6.65e-08!6;UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0000486!2.06e-07!82;UBERON:0004290!3.10e-07!70;UBERON:0004573!5.72e-07!33;UBERON:0004571!5.72e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.42e-17;6!UBERON:0002358;2.42e-17;6!UBERON:0003684;2.42e-17;6!UBERON:0001178;2.42e-17;6!UBERON:0004457;8.76e-15;9!UBERON:0000042;8.76e-15;9!UBERON:0004797;1.51e-10;4!UBERON:0000415;1.51e-10;4!UBERON:0007240;1.51e-10;4!UBERON:0005742;1.51e-10;4!UBERON:0005734;1.51e-10;4!UBERON:0004664;1.51e-10;4!UBERON:0004663;1.51e-10;4!UBERON:0007846;1.49e-09;3!UBERON:0000043;1.49e-09;3!UBERON:0007845;1.49e-09;3!UBERON:0002384;2.08e-07;198!UBERON:0000310;5.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.69e-17,6;UBERON:0002358,3.69e-17,6;UBERON:0003684,3.69e-17,6;UBERON:0001178,3.69e-17,6;UBERON:0002384,1.93e-12,371;UBERON:0004457,1.18e-10,12;UBERON:0000042,1.18e-10,12;UBERON:0000415,1.72e-10,4;UBERON:0007240,1.72e-10,4;UBERON:0005742,1.72e-10,4;UBERON:0005734,1.72e-10,4;UBERON:0004664,1.72e-10,4;UBERON:0004663,1.72e-10,4;UBERON:0007846,1.36e-09,3;UBERON:0000043,1.36e-09,3;UBERON:0007845,1.36e-09,3;UBERON:0000310,4.84e-07,10;UBERON:0005406,8.12e-07,2 | |||
|phase1_expression=4.90531624030503,3.63970890614671,5.21531295155093,2.00146596706261,4.02264984984559,6.10636966870258,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0,0.579386075843295,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,1.32409180813219,9.17877186396204,1.06400514659507,1.12135520028461,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0,1.72852777344,0.468642863667593,0.624320153660641,0,0,0,0,0,0,0,0.206651562351531,3.56400857184616,1.23633464639278,1.82032272387605,0,0,0,0,0.438977620880838,0.612975591598039,0.901428353439581,0.340296549480063,0.179389635688862,1.70845911054854,0.211931901159562,0.300091096084402,0.309157587715317,1.03056216018252,0.930584281657949,0.675105328965065,0.68205903612839,0.504867548488229,0.920498986422993,0.323292113637624,2.13005755509969,0.705264687593482,0.508681776931463,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.75600456653801,0,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,1.16344544182,0,0,2.92531928243358,3.12022310734098,0,0,0,1.14382394926518,1.08524321078289,0,0,1.06617584622764,0,0.602878754119172,0,0,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,3.11956292296211,2.49800584316026,0.946214490203608,0.702848489956279,0.300946099727719,2.27407504055985,0,2.65690239414175,0.184369168541703,0.781952530212746,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.96972492510043,2.91577749247319,5.05188169979532,9.73857534343327,3.07024349440022,13.8334372183502,2.96836132889982,0.462629081407967,2.48586415438378,0.492762936082855,0,0.232420756919918,0,0.601519410909855,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,1.95018073810956,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.890320356467374,0.330569830721956,0,0,0.10115778085555,0.464845549297286,3.77774816196768,0,0.308033580176089,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0.571890581771475,0.511795582622668,0,1.27281299170375,1.56989728039846,0.179872457583315,0.823611089208164,1.06031162111118,0,1.58510321173008,0.421258456238981,0,1.46228093778771,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0.286822704408103,0.294747123039363,0,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,0,0,0,0,0,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.996239941255349,0,0,0,0,4.0435146396035,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.91153644677601,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,2.52209918479682,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,1.5334921960688,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.909894705249887,0,0,0,0,1.79105763464249,2.10341978862502,2.77402930751307,0.947015026375446,1.0062716070103,1.77962244319307,0.915360273587694,2.11723293268535,2.17612080815893,1.33069634990671,0.955780602982214,1.34940933649081,0.931577741257556,2.90294345488599,7.44356800762386,2.08698024724694,2.25386413495828,2.28483127301277,3.25496586563729,1.45478927362048,0.537052785212442,0,3.18476710958893,0,1.37358282073117,0.673498977531838,0,0,0,0.260994291965212,0.226705925512272,1.389134845943,0,0.895444205407437,0.926404341482917,3.72782884283802,0.353378291891762,3.66536672714738,0.168942440653073,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,2.1160556621441,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,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| ||
|short_description=p@chr6:169617543..169617560,- | |short_description=p@chr6:169617543..169617560,- | ||
}} | }} |
Latest revision as of 22:16, 30 July 2015
Short description: | p@chr6:169617543..169617560, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169617543..169617560, - |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.30e-14 | 12 |
fibroblast | 7.11e-14 | 76 |
somatic stem cell | 4.73e-13 | 433 |
multi fate stem cell | 9.85e-13 | 427 |
stem cell | 1.59e-12 | 441 |
mesenchymal cell | 2.88e-12 | 354 |
connective tissue cell | 9.41e-12 | 361 |
fibroblast of tunica adventitia of artery | 1.72e-10 | 4 |
fibroblast of the aortic adventitia | 1.72e-10 | 4 |
motile cell | 5.96e-10 | 386 |
omentum preadipocyte | 1.21e-09 | 3 |
fibrocyte | 1.36e-09 | 3 |
tendon cell | 1.36e-09 | 3 |
preadipocyte of the breast | 2.17e-09 | 3 |
adipocyte of omentum tissue | 3.18e-09 | 3 |
fat cell | 2.82e-08 | 15 |
adipocyte of breast | 7.26e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.69e-17 | 6 |
peritoneum | 3.69e-17 | 6 |
abdominal cavity | 3.69e-17 | 6 |
visceral peritoneum | 3.69e-17 | 6 |
connective tissue | 1.93e-12 | 371 |
cavity lining | 1.18e-10 | 12 |
serous membrane | 1.18e-10 | 12 |
artery wall | 1.72e-10 | 4 |
tunica adventitia of artery | 1.72e-10 | 4 |
adventitia | 1.72e-10 | 4 |
tunica adventitia of blood vessel | 1.72e-10 | 4 |
aorta tunica adventitia | 1.72e-10 | 4 |
aorta wall | 1.72e-10 | 4 |
dense regular connective tissue | 1.36e-09 | 3 |
tendon | 1.36e-09 | 3 |
regular connective tissue | 1.36e-09 | 3 |
breast | 4.84e-07 | 10 |
perirenal fat | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.97e-14 | 14 |