FFCP PHASE1:Hg19::chr6:169625328..169625341,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:169625328..169625341,-
|short_description=p@chr6:169625328..169625341,-
|description=CAGE_peak_at_chr6:169625328..169625341,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:169625328..169625341,- | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_at_chr6:169625328..169625341,- | |||
|id=chr6:169625328..169625341,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-17!180;CL:0000057!1.07e-15!75;CL:0002334!1.41e-15!12;CL:0000723!1.20e-08!436;CL:0000048!3.02e-08!430;CL:0000034!4.50e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.01e-21;3!CL:0002615;7.09e-21;3!CL:0002334;3.74e-20;12!CL:0000136;2.55e-18;13!CL:0002617;1.51e-14;2!CL:0002580;2.90e-10;3!CL:0002616;2.52e-08;1!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0000216;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.61e-21,3;CL:0002615,1.31e-20,3;CL:0002334,5.80e-20,12;CL:0000136,9.52e-16,15;CL:0002617,1.37e-14,2;CL:0002580,2.53e-10,3;CL:0002616,2.19e-08,1;CL:0000511,3.34e-08,1;CL:0002625,3.34e-08,1;CL:0000216,3.34e-08,1;CL:0000057,3.64e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.14e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.76e-12;14!DOID:2513;2.52e-08;1!DOID:3369;6.40e-08;1!DOID:3571;6.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.33e-12,14;DOID:2513,2.71e-08,1;DOID:3369,4.11e-08,1;DOID:3571,9.94e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.49e-11!6;UBERON:0002358!6.49e-11!6;UBERON:0003684!6.49e-11!6;UBERON:0001178!6.49e-11!6;UBERON:0004457!3.32e-08!12;UBERON:0000042!3.32e-08!12;UBERON:0002199!8.96e-07!45;UBERON:0002416!8.96e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.73e-40;6!UBERON:0002358;1.73e-40;6!UBERON:0003684;1.73e-40;6!UBERON:0001178;1.73e-40;6!UBERON:0004457;3.78e-36;9!UBERON:0000042;3.78e-36;9!UBERON:0002118;1.96e-12;5!UBERON:0000310;3.40e-11;10!UBERON:0001443;3.45e-10;11!UBERON:0004458;7.43e-10;48!UBERON:0002323;3.01e-09;45!UBERON:0007029;6.40e-08;1!UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1!UBERON:0000014;1.05e-07;4!UBERON:0002553;5.06e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.72e-40,6;UBERON:0002358,5.72e-40,6;UBERON:0003684,5.72e-40,6;UBERON:0001178,5.72e-40,6;UBERON:0004457,1.18e-26,12;UBERON:0000042,1.18e-26,12;UBERON:0004458,1.55e-14,49;UBERON:0002323,7.36e-13,46;UBERON:0002118,1.78e-12,5;UBERON:0000310,3.03e-11,10;UBERON:0003886,1.05e-10,54;UBERON:0001443,3.11e-10,11;UBERON:0002553,2.78e-09,61;UBERON:0001136,3.34e-08,1;UBERON:0001343,3.34e-08,1;UBERON:0004910,3.34e-08,1;UBERON:0005154,3.34e-08,1;UBERON:0005295,3.34e-08,1;UBERON:0004813,3.34e-08,1;UBERON:0005297,3.34e-08,1;UBERON:0005294,3.34e-08,1;UBERON:0010141,3.34e-08,1;UBERON:0005891,3.34e-08,1;UBERON:0007029,4.71e-08,1;UBERON:0000014,9.32e-08,4;UBERON:0004923,7.71e-07,66 | |||
|phase1_expression=1.45342703416445,2.14100523890983,1.26858963686374,1.0007329835313,3.5756887554183,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0,2.29469296599051,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0.744467425326359,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,1.42743191037729,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.23297027036899,0.767309866440312,2.80660094433074,3.84417447767103,1.02341449813341,3.05622450172854,0,0.616838775210622,0.887808626565635,0.246381468041427,1.03850885836724,0.581051892299796,0,0.601519410909855,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0.447764408660622,0.467426619694449,0.554805861502613,0.189403005275089,0.50313580350515,0,0.457680136793847,0.907385542579434,0.310874401165561,0.591420599958536,0.318593534327405,0,0.155262956876259,0.829412415681711,2.12673371646396,0,0.601030435988874,1.52322084867518,1.22061219961398,1.09109195521536,0.322231671127465,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0,0,0.537266523244462,0.308801447160972,1.09642024789354,0,1.15748422962549,0,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.45342703416445,2.14100523890983,1.26858963686374,1.0007329835313,3.5756887554183,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0,2.29469296599051,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0.744467425326359,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.623912584592421,1.42743191037729,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.23297027036899,0.767309866440312,2.80660094433074,3.84417447767103,1.02341449813341,3.05622450172854,0,0.616838775210622,0.887808626565635,0.246381468041427,1.03850885836724,0.581051892299796,0,0.601519410909855,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0.447764408660622,0.467426619694449,0.554805861502613,0.189403005275089,0.50313580350515,0,0.457680136793847,0.907385542579434,0.310874401165561,0.591420599958536,0.318593534327405,0,0.155262956876259,0.829412415681711,2.12673371646396,0,0.601030435988874,1.52322084867518,1.22061219961398,1.09109195521536,0.322231671127465,0,1.59238355479446,0,0.343395705182793,0,0,0,0,0,0,0,0,0.537266523244462,0.308801447160972,1.09642024789354,0,1.15748422962549,0,0,0,0.607719912354764,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:169625328..169625341,- | |||
}} | }} |
Latest revision as of 22:16, 30 July 2015
Short description: | p@chr6:169625328..169625341, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169625328..169625341, - |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.61e-21 | 3 |
adipocyte of omentum tissue | 1.31e-20 | 3 |
preadipocyte | 5.80e-20 | 12 |
fat cell | 9.52e-16 | 15 |
adipocyte of breast | 1.37e-14 | 2 |
preadipocyte of the breast | 2.53e-10 | 3 |
perirenal adipocyte cell | 2.19e-08 | 1 |
androgen binding protein secreting cell | 3.34e-08 | 1 |
seminiferous tubule epithelial cell | 3.34e-08 | 1 |
Sertoli cell | 3.34e-08 | 1 |
fibroblast | 3.64e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.72e-40 | 6 |
peritoneum | 5.72e-40 | 6 |
abdominal cavity | 5.72e-40 | 6 |
visceral peritoneum | 5.72e-40 | 6 |
cavity lining | 1.18e-26 | 12 |
serous membrane | 1.18e-26 | 12 |
body cavity or lining | 1.55e-14 | 49 |
body cavity | 7.36e-13 | 46 |
right ovary | 1.78e-12 | 5 |
breast | 3.03e-11 | 10 |
body cavity precursor | 1.05e-10 | 54 |
chest | 3.11e-10 | 11 |
anatomical cavity | 2.78e-09 | 61 |
mesothelium | 3.34e-08 | 1 |
seminiferous tubule of testis | 3.34e-08 | 1 |
epithelium of male gonad | 3.34e-08 | 1 |
epithelial cord | 3.34e-08 | 1 |
sex cord | 3.34e-08 | 1 |
seminiferous tubule epithelium | 3.34e-08 | 1 |
testis sex cord | 3.34e-08 | 1 |
genital ridge | 3.34e-08 | 1 |
primitive sex cord of indifferent gonad | 3.34e-08 | 1 |
coelomic epithelium | 3.34e-08 | 1 |
surface | 4.71e-08 | 1 |
zone of skin | 9.32e-08 | 4 |
organ component layer | 7.71e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.33e-12 | 14 |
basal cell carcinoma | 2.71e-08 | 1 |
peripheral primitive neuroectodermal tumor | 4.11e-08 | 1 |
liver cancer | 9.94e-08 | 1 |