FFCP PHASE1:Hg19::chr6:31680315..31680332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31680315..31680332,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr6:31680315..31680332,+ | |description=CAGE_peak_at_chr6:31680315..31680332,+ | ||
|id=chr6:31680315..31680332,+ | |id=chr6:31680315..31680332,+ | ||
|ontology_enrichment_celltype=CL:0002274!3.71e-29!5;CL:0000457!3.71e-29!5;CL:0002191!3.71e-29!5;CL:0000097!3.71e-29!5;CL:0000831!3.71e-29!5;CL:0002028!3.71e-29!5;CL:0000575!1.36e-19!2;CL:0000163!2.45e-16!9;CL:0000240!5.40e-14!6;CL:0000311!5.40e-14!6;CL:0000079!5.40e-14!6;CL:0000237!5.40e-14!6;CL:0000036!5.40e-14!6;CL:0000357!5.40e-14!6;CL:0000114!5.40e-14!6;CL:0002178!8.35e-13!3;CL:0002159!1.83e-11!13;CL:0002336!3.01e-10!1;CL:0002261!3.01e-10!1;CL:0002170!3.01e-10!1;CL:0000312!4.22e-08!5;CL:0002077!8.05e-07!33 | |ontology_enrichment_celltype=CL:0002274!3.71e-29!5;CL:0000457!3.71e-29!5;CL:0002191!3.71e-29!5;CL:0000097!3.71e-29!5;CL:0000831!3.71e-29!5;CL:0002028!3.71e-29!5;CL:0000575!1.36e-19!2;CL:0000163!2.45e-16!9;CL:0000240!5.40e-14!6;CL:0000311!5.40e-14!6;CL:0000079!5.40e-14!6;CL:0000237!5.40e-14!6;CL:0000036!5.40e-14!6;CL:0000357!5.40e-14!6;CL:0000114!5.40e-14!6;CL:0002178!8.35e-13!3;CL:0002159!1.83e-11!13;CL:0002336!3.01e-10!1;CL:0002261!3.01e-10!1;CL:0002170!3.01e-10!1;CL:0000312!4.22e-08!5;CL:0002077!8.05e-07!33 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!8.14e-11!1;DOID:1357!8.14e-11!1;DOID:3151!1.43e-10!1;DOID:3149!1.43e-10!1 | |ontology_enrichment_disease=DOID:0050619!8.14e-11!1;DOID:1357!8.14e-11!1;DOID:3151!1.43e-10!1;DOID:3149!1.43e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1749;2.00e-08;14!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1749,2.00e-08,14;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001764!8.14e-11!1;UBERON:0001825!8.14e-11!1;UBERON:0000964!2.88e-10!4;UBERON:0004348!2.88e-10!4;UBERON:0005427!2.88e-10!4;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1 | |ontology_enrichment_uberon=UBERON:0001764!8.14e-11!1;UBERON:0001825!8.14e-11!1;UBERON:0000964!2.88e-10!4;UBERON:0004348!2.88e-10!4;UBERON:0005427!2.88e-10!4;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr6:31680315..31680332,+ | |short_description=p@chr6:31680315..31680332,+ | ||
}} | }} |
Latest revision as of 00:05, 31 July 2015
Short description: | p@chr6:31680315..31680332, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31680315..31680332, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
squamous cell carcinoma | 2.00e-08 | 14 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |