FFCP PHASE1:Hg19::chr6:33043568..33043579,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:33043568..33043579,- | |||
|coexpression_cluster_id=C569 | |coexpression_cluster_id=C569 | ||
|description=CAGE_peak_at_chr6:33043568..33043579,- | |description=CAGE_peak_at_chr6:33043568..33043579,- | ||
|id=chr6:33043568..33043579,- | |id=chr6:33043568..33043579,- | ||
|ontology_enrichment_celltype=CL:0000738!2.96e-57!140;CL:0002087!2.14e-48!119;CL:0000037!3.76e-46!172;CL:0000566!3.76e-46!172;CL:0000988!6.58e-43!182;CL:0002031!7.85e-42!124;CL:0002032!3.93e-37!165;CL:0000837!3.93e-37!165;CL:0000838!1.42e-36!52;CL:0000542!9.64e-36!53;CL:0000051!9.64e-36!53;CL:0000945!2.66e-30!24;CL:0000826!2.66e-30!24;CL:0000236!2.24e-27!14;CL:0002393!1.01e-21!9;CL:0002397!1.01e-21!9;CL:0002057!3.69e-17!42;CL:0000134!3.05e-16!358;CL:0000860!9.98e-16!45;CL:0002320!1.12e-15!365;CL:0000219!1.10e-13!390;CL:0000451!2.25e-13!10;CL:0002009!2.65e-12!65;CL:0000048!4.87e-12!430;CL:0000034!5.42e-12!444;CL:0000723!1.09e-11!436;CL:0002194!2.99e-11!63;CL:0000576!2.99e-11!63;CL:0000040!2.99e-11!63;CL:0000559!2.99e-11!63;CL:0000766!4.28e-11!76;CL:0000557!6.93e-11!71;CL:0000453!1.77e-10!5;CL:0000784!2.77e-10!3;CL:0000763!9.88e-10!112;CL:0000049!9.88e-10!112;CL:0000839!1.03e-09!70;CL:0000623!1.18e-09!3;CL:0000825!1.18e-09!3;CL:0000842!1.29e-09!3;CL:0000625!2.39e-09!11;CL:0000990!9.23e-09!8;CL:0000791!2.44e-07!18;CL:0000789!2.44e-07!18;CL:0002420!2.44e-07!18;CL:0002419!2.44e-07!18;CL:0000790!2.44e-07!18;CL:0000224!2.60e-07!4 | |ontology_enrichment_celltype=CL:0000738!2.96e-57!140;CL:0002087!2.14e-48!119;CL:0000037!3.76e-46!172;CL:0000566!3.76e-46!172;CL:0000988!6.58e-43!182;CL:0002031!7.85e-42!124;CL:0002032!3.93e-37!165;CL:0000837!3.93e-37!165;CL:0000838!1.42e-36!52;CL:0000542!9.64e-36!53;CL:0000051!9.64e-36!53;CL:0000945!2.66e-30!24;CL:0000826!2.66e-30!24;CL:0000236!2.24e-27!14;CL:0002393!1.01e-21!9;CL:0002397!1.01e-21!9;CL:0002057!3.69e-17!42;CL:0000134!3.05e-16!358;CL:0000860!9.98e-16!45;CL:0002320!1.12e-15!365;CL:0000219!1.10e-13!390;CL:0000451!2.25e-13!10;CL:0002009!2.65e-12!65;CL:0000048!4.87e-12!430;CL:0000034!5.42e-12!444;CL:0000723!1.09e-11!436;CL:0002194!2.99e-11!63;CL:0000576!2.99e-11!63;CL:0000040!2.99e-11!63;CL:0000559!2.99e-11!63;CL:0000766!4.28e-11!76;CL:0000557!6.93e-11!71;CL:0000453!1.77e-10!5;CL:0000784!2.77e-10!3;CL:0000763!9.88e-10!112;CL:0000049!9.88e-10!112;CL:0000839!1.03e-09!70;CL:0000623!1.18e-09!3;CL:0000825!1.18e-09!3;CL:0000842!1.29e-09!3;CL:0000625!2.39e-09!11;CL:0000990!9.23e-09!8;CL:0000791!2.44e-07!18;CL:0000789!2.44e-07!18;CL:0002420!2.44e-07!18;CL:0002419!2.44e-07!18;CL:0000790!2.44e-07!18;CL:0000224!2.60e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.75e-80;13!CL:0000945;7.76e-43;24!CL:0002393;9.83e-28;6!CL:0002397;9.83e-28;6!CL:0000542;3.13e-16;53!CL:0000784;1.15e-14;3!CL:0000451;3.95e-09;10!CL:0000840;5.84e-08;5!CL:0002087;4.35e-07;104!CL:0000738;5.00e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.65e-74,14;CL:0000945,7.27e-43,24;CL:0000826,7.27e-43,24;CL:0000738,2.99e-25,136;CL:0002087,6.39e-21,115;CL:0002031,4.76e-20,120;CL:0000037,5.03e-20,168;CL:0000838,4.27e-19,52;CL:0000988,6.84e-19,177;CL:0000542,1.04e-18,53;CL:0000051,1.04e-18,53;CL:0002393,1.34e-18,9;CL:0002397,1.34e-18,9;CL:0002032,1.86e-16,161;CL:0000837,1.86e-16,161;CL:0000784,1.32e-14,3;CL:0000451,4.06e-09,10;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000840,5.55e-08,5;CL:0001029,5.55e-08,5;CL:0000219,2.99e-07,386;CL:0001014,9.96e-07,2;CL:0001016,9.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.13e-16;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.63e-15!375;UBERON:0002371!2.60e-10!80;UBERON:0002390!5.36e-10!102;UBERON:0003061!5.36e-10!102;UBERON:0002193!1.46e-09!112;UBERON:0001474!2.87e-09!86;UBERON:0002405!2.49e-07!115;UBERON:0004765!3.18e-07!101;UBERON:0001434!3.18e-07!101 | |ontology_enrichment_uberon=UBERON:0002384!6.63e-15!375;UBERON:0002371!2.60e-10!80;UBERON:0002390!5.36e-10!102;UBERON:0003061!5.36e-10!102;UBERON:0002193!1.46e-09!112;UBERON:0001474!2.87e-09!86;UBERON:0002405!2.49e-07!115;UBERON:0004765!3.18e-07!101;UBERON:0001434!3.18e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.05e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,1.54816123316076,0,0,0,0,0,0.293600439334847,2.76997704265939,0.802177789880567,1.30206522429511,0,0,0,0,0.377875943688809,0,0,0,0,0,0.768482119587302,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0.845021145247767,1.06302149982522,1.67726916406701,0.786300418025466,0.300353785683013,0.803627933485401,0.570025487482497,0,0.182664153764634,1.75996244461323,3.27683166757279,2.66852776159066,8.10787422876364,2.40237592221607,4.59801951963587,0.661044872784862,3.81621501814146,5.69212969109448,4.11066032559657,3.05818582500183,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.930053882193542,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,1.54816123316076,0,0,0,0,0,0.293600439334847,2.76997704265939,0.802177789880567,1.30206522429511,0,0,0,0,0.377875943688809,0,0,0,0,0,0.768482119587302,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0.845021145247767,1.06302149982522,1.67726916406701,0.786300418025466,0.300353785683013,0.803627933485401,0.570025487482497,0,0.182664153764634,1.75996244461323,3.27683166757279,2.66852776159066,8.10787422876364,2.40237592221607,4.59801951963587,0.661044872784862,3.81621501814146,5.69212969109448,4.11066032559657,3.05818582500183,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.930053882193542,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr6:33043568..33043579,- | |short_description=p@chr6:33043568..33043579,- | ||
}} | }} |
Latest revision as of 00:36, 31 July 2015
Short description: | p@chr6:33043568..33043579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:33043568..33043579, - |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.65e-74 | 14 |
lymphocyte of B lineage | 7.27e-43 | 24 |
pro-B cell | 7.27e-43 | 24 |
leukocyte | 2.99e-25 | 136 |
nongranular leukocyte | 6.39e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 4.76e-20 | 120 |
hematopoietic stem cell | 5.03e-20 | 168 |
lymphoid lineage restricted progenitor cell | 4.27e-19 | 52 |
hematopoietic cell | 6.84e-19 | 177 |
lymphocyte | 1.04e-18 | 53 |
common lymphoid progenitor | 1.04e-18 | 53 |
intermediate monocyte | 1.34e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.34e-18 | 9 |
hematopoietic oligopotent progenitor cell | 1.86e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-16 | 161 |
plasmacytoid dendritic cell | 1.32e-14 | 3 |
dendritic cell | 4.06e-09 | 10 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
immature conventional dendritic cell | 5.55e-08 | 5 |
common dendritic progenitor | 5.55e-08 | 5 |
motile cell | 2.99e-07 | 386 |
CD1a-positive Langerhans cell | 9.96e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.05e-07 | 371 |