FFCP PHASE1:Hg19::chr6:3912207..3912217,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BX647262_5end | |association_with_transcript=0bp_to_BX647262_5end | ||
|cluster_id=chr6:3912207..3912217,- | |||
|coexpression_cluster_id=C4600 | |||
|description=CAGE_peak_3_at_BX647262_5end | |description=CAGE_peak_3_at_BX647262_5end | ||
|id=chr6:3912207..3912217,- | |id=chr6:3912207..3912217,- | ||
|ontology_enrichment_celltype=CL:0002139!1.33e-11!24;CL:0000213!2.03e-08!57;CL:0000215!2.03e-08!57;CL:0005020!2.21e-08!6;CL:0002138!2.21e-08!6;CL:0005022!2.21e-08!6;CL:1000413!1.77e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.33e-11!24;CL:0000213!2.03e-08!57;CL:0000215!2.03e-08!57;CL:0005020!2.21e-08!6;CL:0002138!2.21e-08!6;CL:0005022!2.21e-08!6;CL:1000413!1.77e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.30e-09;1!CL:0002625;1.30e-09;1!CL:0000216;1.30e-09;1!CL:1000413;4.36e-09;9!CL:0002139;1.26e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.91e-10,1;CL:0002625,8.91e-10,1;CL:0000216,8.91e-10,1;CL:1000413,4.95e-09,9;CL:0002139,1.48e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.74e-10;1!UBERON:0010227;1.30e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;5.56e-12;3!DOID:3112;1.30e-09;1!DOID:3369;1.30e-09;1!DOID:3571;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,4.72e-12,3;DOID:3571,7.50e-10,1;DOID:3369,9.70e-10,1;DOID:3112,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001009!6.21e-10!113;UBERON:0004872!7.24e-09!84;UBERON:0002049!9.30e-09!79;UBERON:0007798!9.30e-09!79;UBERON:0005631!1.19e-08!14;UBERON:0000158!1.19e-08!14;UBERON:0003914!1.38e-08!118;UBERON:0004535!2.02e-08!110;UBERON:0007100!1.44e-07!27;UBERON:0000055!1.67e-07!69;UBERON:0003915!1.77e-07!9;UBERON:0004700!1.77e-07!9;UBERON:0001917!1.77e-07!9;UBERON:0003688!2.26e-07!6;UBERON:0002358!2.26e-07!6;UBERON:0003684!2.26e-07!6;UBERON:0001178!2.26e-07!6;UBERON:0003124!3.15e-07!7;UBERON:0000487!7.79e-07!22 | |ontology_enrichment_uberon=UBERON:0001009!6.21e-10!113;UBERON:0004872!7.24e-09!84;UBERON:0002049!9.30e-09!79;UBERON:0007798!9.30e-09!79;UBERON:0005631!1.19e-08!14;UBERON:0000158!1.19e-08!14;UBERON:0003914!1.38e-08!118;UBERON:0004535!2.02e-08!110;UBERON:0007100!1.44e-07!27;UBERON:0000055!1.67e-07!69;UBERON:0003915!1.77e-07!9;UBERON:0004700!1.77e-07!9;UBERON:0001917!1.77e-07!9;UBERON:0003688!2.26e-07!6;UBERON:0002358!2.26e-07!6;UBERON:0003684!2.26e-07!6;UBERON:0001178!2.26e-07!6;UBERON:0003124!3.15e-07!7;UBERON:0000487!7.79e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.30e-09;1!UBERON:0001136;1.30e-09;1!UBERON:0001343;1.30e-09;1!UBERON:0004910;1.30e-09;1!UBERON:0004813;1.30e-09;1!UBERON:0003915;4.36e-09;9!UBERON:0004700;4.36e-09;9!UBERON:0001917;4.36e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.91e-10,1;UBERON:0001343,8.91e-10,1;UBERON:0004910,8.91e-10,1;UBERON:0005154,8.91e-10,1;UBERON:0005295,8.91e-10,1;UBERON:0004813,8.91e-10,1;UBERON:0005297,8.91e-10,1;UBERON:0005294,8.91e-10,1;UBERON:0010141,8.91e-10,1;UBERON:0005891,8.91e-10,1;UBERON:0002079,1.15e-09,1;UBERON:0003915,4.95e-09,9;UBERON:0004700,4.95e-09,9;UBERON:0001917,4.95e-09,9 | |||
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| ||
|short_description=p3@BX647262 | |short_description=p3@BX647262 | ||
}} | }} |
Latest revision as of 01:24, 31 July 2015
Short description: | p3@BX647262 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BX647262_5end |
Coexpression cluster: | C4600_heart_chorionic_Endothelial_Sertoli_Intestinal_Ewing_hepatic |
Association with transcript: | 0bp_to_BX647262_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.91e-10 | 1 |
seminiferous tubule epithelial cell | 8.91e-10 | 1 |
Sertoli cell | 8.91e-10 | 1 |
endothelial cell of artery | 4.95e-09 | 9 |
endothelial cell of vascular tree | 1.48e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.91e-10 | 1 |
seminiferous tubule of testis | 8.91e-10 | 1 |
epithelium of male gonad | 8.91e-10 | 1 |
epithelial cord | 8.91e-10 | 1 |
sex cord | 8.91e-10 | 1 |
seminiferous tubule epithelium | 8.91e-10 | 1 |
testis sex cord | 8.91e-10 | 1 |
genital ridge | 8.91e-10 | 1 |
primitive sex cord of indifferent gonad | 8.91e-10 | 1 |
coelomic epithelium | 8.91e-10 | 1 |
left cardiac atrium | 1.15e-09 | 1 |
endothelial tube | 4.95e-09 | 9 |
arterial system endothelium | 4.95e-09 | 9 |
endothelium of artery | 4.95e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.72e-12 | 3 |
liver cancer | 7.50e-10 | 1 |
peripheral primitive neuroectodermal tumor | 9.70e-10 | 1 |
papillary adenocarcinoma | 1.06e-09 | 1 |