FFCP PHASE1:Hg19::chr6:45626924..45626929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:45626924..45626929,+ | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_at_chr6:45626924..45626929,+ | |description=CAGE_peak_at_chr6:45626924..45626929,+ | ||
|id=chr6:45626924..45626929,+ | |id=chr6:45626924..45626929,+ | ||
|ontology_enrichment_celltype=CL:0002603!4.22e-19!3;CL:0000128!5.89e-18!7;CL:0000126!5.89e-18!7;CL:0000127!5.89e-18!7;CL:0002453!5.89e-18!7;CL:0002149!6.50e-10!6;CL:0002255!6.50e-10!6;CL:0002549!8.04e-08!2;CL:0000243!9.94e-08!15;CL:0000125!9.94e-08!15;CL:0000030!9.94e-08!15;CL:0000339!9.94e-08!15;CL:0000095!5.75e-07!17;CL:0000123!5.75e-07!17 | |ontology_enrichment_celltype=CL:0002603!4.22e-19!3;CL:0000128!5.89e-18!7;CL:0000126!5.89e-18!7;CL:0000127!5.89e-18!7;CL:0002453!5.89e-18!7;CL:0002149!6.50e-10!6;CL:0002255!6.50e-10!6;CL:0002549!8.04e-08!2;CL:0000243!9.94e-08!15;CL:0000125!9.94e-08!15;CL:0000030!9.94e-08!15;CL:0000339!9.94e-08!15;CL:0000095!5.75e-07!17;CL:0000123!5.75e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002603;3.96e-66;3!CL:0000128;3.92e-29;7!CL:0000126;3.92e-29;7!CL:0000127;3.92e-29;7!CL:0000243;1.06e-12;15!CL:0000125;1.06e-12;15!CL:0000095;1.77e-11;17!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6!CL:0002319;2.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.35e-66,3;CL:0000128,3.65e-29,7;CL:0000126,3.65e-29,7;CL:0000127,3.65e-29,7;CL:0002453,3.65e-29,7;CL:0000243,1.03e-12,15;CL:0000125,1.03e-12,15;CL:0000030,1.03e-12,15;CL:0000339,1.03e-12,15;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6;CL:0002319,2.14e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000339;1.06e-12;15 | |||
|ontology_enrichment_disease=DOID:3001!6.50e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.50e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001154!1.41e-14!1;UBERON:0001153!1.41e-14!1;UBERON:0002037!4.97e-10!6;UBERON:0006215!4.97e-10!6;UBERON:0003947!8.04e-08!2;UBERON:0005629!8.04e-08!2;UBERON:0005358!8.04e-08!2;UBERON:0001886!8.04e-08!2;UBERON:0004086!8.04e-08!2;UBERON:0005282!8.04e-08!2;UBERON:0005281!8.04e-08!2;UBERON:0002680!5.69e-07!9;UBERON:0001895!5.69e-07!9;UBERON:0010092!5.69e-07!9 | |ontology_enrichment_uberon=UBERON:0001154!1.41e-14!1;UBERON:0001153!1.41e-14!1;UBERON:0002037!4.97e-10!6;UBERON:0006215!4.97e-10!6;UBERON:0003947!8.04e-08!2;UBERON:0005629!8.04e-08!2;UBERON:0005358!8.04e-08!2;UBERON:0001886!8.04e-08!2;UBERON:0004086!8.04e-08!2;UBERON:0005282!8.04e-08!2;UBERON:0005281!8.04e-08!2;UBERON:0002680!5.69e-07!9;UBERON:0001895!5.69e-07!9;UBERON:0010092!5.69e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.08e-34;6!UBERON:0002680;6.07e-23;9!UBERON:0001895;6.07e-23;9!UBERON:0004733;1.64e-17;12!UBERON:0002028;1.64e-17;12!UBERON:0004732;2.95e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.35e-34,6;UBERON:0006215,8.35e-34,6;UBERON:0002680,5.74e-23,9;UBERON:0001895,5.74e-23,9;UBERON:0010092,5.74e-23,9;UBERON:0004733,1.57e-17,12;UBERON:0002028,1.57e-17,12;UBERON:0007277,1.57e-17,12;UBERON:0004732,2.84e-16,13;UBERON:0003076,2.94e-14,15;UBERON:0003057,2.94e-14,15 | |||
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|short_description=p@chr6:45626924..45626929,+ | |short_description=p@chr6:45626924..45626929,+ | ||
}} | }} |
Latest revision as of 02:03, 31 July 2015
Short description: | p@chr6:45626924..45626929, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:45626924..45626929, + |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.35e-66 | 3 |
oligodendrocyte | 3.65e-29 | 7 |
macroglial cell | 3.65e-29 | 7 |
astrocyte | 3.65e-29 | 7 |
oligodendrocyte precursor cell | 3.65e-29 | 7 |
glial cell (sensu Vertebrata) | 1.03e-12 | 15 |
glial cell | 1.03e-12 | 15 |
glioblast | 1.03e-12 | 15 |
glioblast (sensu Vertebrata) | 1.03e-12 | 15 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
neural cell | 2.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.35e-34 | 6 |
rhombic lip | 8.35e-34 | 6 |
regional part of metencephalon | 5.74e-23 | 9 |
metencephalon | 5.74e-23 | 9 |
future metencephalon | 5.74e-23 | 9 |
segmental subdivision of hindbrain | 1.57e-17 | 12 |
hindbrain | 1.57e-17 | 12 |
presumptive hindbrain | 1.57e-17 | 12 |
segmental subdivision of nervous system | 2.84e-16 | 13 |
posterior neural tube | 2.94e-14 | 15 |
chordal neural plate | 2.94e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.57e-09 | 6 |