Personal tools

FFCP PHASE1:Hg19::chr6:5491081..5491106,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr6:5491081..5491106,+
|coexpression_cluster_id=C86
|coexpression_cluster_id=C86
|description=CAGE_peak_at_chr6:5491081..5491106,+
|description=CAGE_peak_at_chr6:5491081..5491106,+
|id=chr6:5491081..5491106,+
|id=chr6:5491081..5491106,+
|ontology_enrichment_celltype=CL:0000810!3.98e-14!1;CL:0000895!3.98e-14!1;CL:0002436!3.98e-14!1;CL:0002427!3.98e-14!1;CL:0002428!3.98e-14!1;CL:0002429!3.98e-14!1;CL:0002433!3.98e-14!1;CL:0002431!3.98e-14!1;CL:0002432!3.98e-14!1;CL:0002253!9.25e-08!2;CL:0000893!1.05e-07!2;CL:0002489!1.05e-07!2;CL:0000809!1.05e-07!2;CL:0000808!1.05e-07!2;CL:0000894!1.05e-07!2;CL:0000806!1.05e-07!2;CL:0000807!1.05e-07!2;CL:0000805!1.05e-07!2;CL:0002425!1.05e-07!2;CL:0002535!1.28e-07!2
|ontology_enrichment_celltype=CL:0000810!3.98e-14!1;CL:0000895!3.98e-14!1;CL:0002436!3.98e-14!1;CL:0002427!3.98e-14!1;CL:0002428!3.98e-14!1;CL:0002429!3.98e-14!1;CL:0002433!3.98e-14!1;CL:0002431!3.98e-14!1;CL:0002432!3.98e-14!1;CL:0002253!9.25e-08!2;CL:0000893!1.05e-07!2;CL:0002489!1.05e-07!2;CL:0000809!1.05e-07!2;CL:0000808!1.05e-07!2;CL:0000894!1.05e-07!2;CL:0000806!1.05e-07!2;CL:0000807!1.05e-07!2;CL:0000805!1.05e-07!2;CL:0002425!1.05e-07!2;CL:0002535!1.28e-07!2
|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31
|ontology_enrichment_disease=DOID:0050619!3.50e-14!1;DOID:1357!3.50e-14!1;DOID:5409!3.02e-13!4;DOID:1325!5.87e-08!7;DOID:3904!5.87e-08!7;DOID:0050615!1.38e-07!16
|ontology_enrichment_disease=DOID:0050619!3.50e-14!1;DOID:1357!3.50e-14!1;DOID:5409!3.02e-13!4;DOID:1325!5.87e-08!7;DOID:3904!5.87e-08!7;DOID:0050615!1.38e-07!16
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25
|ontology_enrichment_uberon=UBERON:0001764!3.50e-14!1;UBERON:0001825!3.50e-14!1;UBERON:0002370!2.08e-13!4;UBERON:0005058!2.08e-13!4;UBERON:0009113!2.08e-13!4;UBERON:0003295!2.08e-13!4;UBERON:0005562!2.08e-13!4;UBERON:0003351!3.02e-09!6;UBERON:0004177!4.75e-08!7;UBERON:0006955!1.28e-07!2;UBERON:0004801!1.28e-07!2;UBERON:0004807!2.59e-07!28
|ontology_enrichment_uberon=UBERON:0001764!3.50e-14!1;UBERON:0001825!3.50e-14!1;UBERON:0002370!2.08e-13!4;UBERON:0005058!2.08e-13!4;UBERON:0009113!2.08e-13!4;UBERON:0003295!2.08e-13!4;UBERON:0005562!2.08e-13!4;UBERON:0003351!3.02e-09!6;UBERON:0004177!4.75e-08!7;UBERON:0006955!1.28e-07!2;UBERON:0004801!1.28e-07!2;UBERON:0004807!2.59e-07!28
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.3621285430263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.3621285430263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr6:5491081..5491106,+
|short_description=p@chr6:5491081..5491106,+
}}
}}

Latest revision as of 02:27, 31 July 2015

Short description:p@chr6:5491081..5491106, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr6:5491081..5491106, +
Coexpression cluster:C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
20
40
60
80
100




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr6:5491081..5491106,%2B&oldid=3624997"