FFCP PHASE1:Hg19::chr6:5498703..5498727,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:5498703..5498727,+
|short_description=p@chr6:5498703..5498727,+
|description=CAGE_peak_at_chr6:5498703..5498727,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:5498703..5498727,+ | |||
|description=CAGE_peak_at_chr6:5498703..5498727,+ | |||
|id=chr6:5498703..5498727,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.84e-28!180;CL:0000057!2.15e-27!75;CL:0002620!4.04e-24!23;CL:0000048!1.82e-14!430;CL:0000723!8.35e-14!436;CL:0000034!5.91e-13!444;CL:0002371!1.53e-11!591;CL:0000144!4.84e-10!625;CL:0000219!1.29e-09!390;CL:0002320!1.78e-09!365;CL:0002551!5.79e-09!6;CL:0000134!1.55e-08!358;CL:0000548!4.76e-08!679;CL:0000004!4.76e-08!679;CL:0000255!4.76e-08!679;CL:0000003!6.19e-08!722;CL:0000012!7.81e-08!682;CL:0002570!2.47e-07!8;CL:0000183!8.66e-07!59;CL:0002559!9.09e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.24e-29;23!CL:0002551;2.77e-25;6!CL:0002559;2.62e-22;5!CL:0000346;6.51e-14;3!CL:1000428;6.51e-14;3!CL:0002561;3.81e-10;2!CL:0000057;6.49e-10;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.18e-29,23;CL:0002551,2.27e-25,6;CL:0002559,8.54e-23,5;CL:0000346,2.10e-14,3;CL:1000428,2.10e-14,3;CL:0000057,1.32e-12,76;CL:0002561,3.83e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.25e-07!5;DOID:450!1.25e-07!5;DOID:66!1.25e-07!5;DOID:423!1.25e-07!5;DOID:0080000!1.25e-07!5;DOID:11722!1.25e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.29e-08;5!DOID:450;1.29e-08;5!DOID:66;1.29e-08;5!DOID:423;1.29e-08;5!DOID:0080000;1.29e-08;5!DOID:11722;1.29e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.20e-08,5;DOID:450,1.20e-08,5;DOID:66,1.20e-08,5;DOID:423,1.20e-08,5;DOID:0080000,1.20e-08,5;DOID:11722,1.20e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.67e-21!45;UBERON:0002416!6.67e-21!45;UBERON:0002097!8.56e-20!40;UBERON:0000914!8.64e-14!83;UBERON:0002329!8.64e-14!83;UBERON:0003077!8.64e-14!83;UBERON:0003059!8.64e-14!83;UBERON:0007282!8.64e-14!83;UBERON:0009618!8.64e-14!83;UBERON:0007285!8.64e-14!83;UBERON:0003102!9.18e-14!95;UBERON:0002067!7.11e-13!9;UBERON:0004016!7.11e-13!9;UBERON:0010083!7.11e-13!9;UBERON:0004290!8.12e-11!70;UBERON:0002384!1.28e-10!375;UBERON:0000486!6.98e-08!82;UBERON:0005256!6.21e-07!143;UBERON:0002073!9.09e-07!4;UBERON:0005086!9.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.88e-37;9!UBERON:0002097;1.82e-22;41!UBERON:0002073;2.62e-22;5!UBERON:0003102;6.79e-17;50!UBERON:0002199;8.74e-16;46!UBERON:0002416;8.74e-16;46!UBERON:0000412;6.51e-14;3!UBERON:0001992;6.51e-14;3!UBERON:0005933;3.81e-10;2!UBERON:0005942;3.81e-10;2!UBERON:0005932;3.81e-10;2!UBERON:0001003;2.99e-07;15!UBERON:0007376;2.99e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,5.08e-38,9;UBERON:0004016,5.08e-38,9;UBERON:0010083,5.08e-38,9;UBERON:0002097,9.58e-31,41;UBERON:0002199,6.18e-27,46;UBERON:0002416,6.18e-27,46;UBERON:0002073,8.54e-23,5;UBERON:0005086,8.54e-23,5;UBERON:0000412,2.10e-14,3;UBERON:0001992,2.10e-14,3;UBERON:0003102,4.19e-13,99;UBERON:0002329,2.36e-10,71;UBERON:0003059,2.36e-10,71;UBERON:0007282,2.36e-10,71;UBERON:0004290,2.36e-10,71;UBERON:0009618,2.36e-10,71;UBERON:0003077,3.64e-10,72;UBERON:0007285,3.64e-10,72;UBERON:0005933,3.83e-10,2;UBERON:0005942,3.83e-10,2;UBERON:0005932,3.83e-10,2;UBERON:0007524,5.56e-10,73;UBERON:0007503,3.87e-09,78;UBERON:0000486,2.13e-08,83;UBERON:0001003,2.12e-07,15;UBERON:0007376,2.12e-07,15;UBERON:0007383,2.12e-07,15 | |||
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| ||
|short_description=p@chr6:5498703..5498727,+ | |||
}} | }} |
Latest revision as of 02:27, 31 July 2015
Short description: | p@chr6:5498703..5498727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:5498703..5498727, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.18e-29 | 23 |
fibroblast of dermis | 2.27e-25 | 6 |
hair follicle cell | 8.54e-23 | 5 |
hair follicle dermal papilla cell | 2.10e-14 | 3 |
stem cell of epidermis | 2.10e-14 | 3 |
fibroblast | 1.32e-12 | 76 |
outer root sheath cell | 3.83e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 5.08e-38 | 9 |
dermatome | 5.08e-38 | 9 |
future dermis | 5.08e-38 | 9 |
skin of body | 9.58e-31 | 41 |
integument | 6.18e-27 | 46 |
integumental system | 6.18e-27 | 46 |
hair follicle | 8.54e-23 | 5 |
hair follicle placode | 8.54e-23 | 5 |
dermal papilla | 2.10e-14 | 3 |
papillary layer of dermis | 2.10e-14 | 3 |
surface structure | 4.19e-13 | 99 |
somite | 2.36e-10 | 71 |
presomitic mesoderm | 2.36e-10 | 71 |
presumptive segmental plate | 2.36e-10 | 71 |
dermomyotome | 2.36e-10 | 71 |
trunk paraxial mesoderm | 2.36e-10 | 71 |
paraxial mesoderm | 3.64e-10 | 72 |
presumptive paraxial mesoderm | 3.64e-10 | 72 |
hair root sheath | 3.83e-10 | 2 |
hair outer root sheath | 3.83e-10 | 2 |
bulb of hair follicle | 3.83e-10 | 2 |
dense mesenchyme tissue | 5.56e-10 | 73 |
epithelial vesicle | 3.87e-09 | 78 |
multilaminar epithelium | 2.13e-08 | 83 |
skin epidermis | 2.12e-07 | 15 |
outer epithelium | 2.12e-07 | 15 |
enveloping layer of ectoderm | 2.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.20e-08 | 5 |
myotonic disease | 1.20e-08 | 5 |
muscle tissue disease | 1.20e-08 | 5 |
myopathy | 1.20e-08 | 5 |
muscular disease | 1.20e-08 | 5 |
myotonic dystrophy | 1.20e-08 | 5 |