FFCP PHASE1:Hg19::chr6:56484716..56484736,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:56484716..56484736,-
|short_description=p@chr6:56484716..56484736,-
|description=CAGE_peak_at_chr6:56484716..56484736,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:56484716..56484736,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56484716..56484736,- | |||
|id=chr6:56484716..56484736,- | |||
|ontology_enrichment_celltype=CL:0002076!9.04e-14!43;CL:0000223!1.16e-13!59;CL:0000066!1.15e-12!254;CL:0002368!2.46e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.00e-27;42!CL:0002623;4.84e-26;3!CL:0002251;6.59e-20;20!CL:0002368;4.08e-16;13!CL:0000622;7.04e-16;5!CL:0000154;2.51e-13;6!CL:0000240;3.29e-13;6!CL:0000311;3.29e-13;6!CL:0000079;3.29e-13;6!CL:0000237;3.29e-13;6!CL:0002166;7.77e-12;3!CL:0002336;5.54e-10;1!CL:0002261;5.54e-10;1!CL:0002170;5.54e-10;1!CL:0002159;1.27e-09;14!CL:0000244;2.91e-09;4!CL:0002327;2.91e-09;4!CL:0000731;2.91e-09;4!CL:0000150;4.68e-09;9!CL:0000312;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.46e-31,42;CL:0002623,5.28e-26,3;CL:0000223,3.00e-22,58;CL:0002251,7.62e-20,20;CL:0002368,4.63e-16,13;CL:0000622,7.41e-16,5;CL:0000154,2.62e-13,6;CL:0000240,3.50e-13,6;CL:0000311,3.50e-13,6;CL:0000079,3.50e-13,6;CL:0000237,3.50e-13,6;CL:0000036,3.50e-13,6;CL:0000357,3.50e-13,6;CL:0000114,3.50e-13,6;CL:0002166,4.99e-12,3;CL:0000066,3.74e-11,253;CL:0002336,5.31e-10,1;CL:0002261,5.31e-10,1;CL:0002170,5.31e-10,1;CL:0002159,1.11e-09,14;CL:0000244,2.68e-09,4;CL:0000731,2.68e-09,4;CL:0002327,2.91e-09,4;CL:0000150,4.81e-09,9;CL:0000312,1.50e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;3.29e-13;6!CL:0000114;3.29e-13;6!CL:0000223;2.10e-10;58 | |||
|ontology_enrichment_disease=DOID:162!2.92e-09!235;DOID:0050687!4.54e-09!143;DOID:305!4.69e-09!106;DOID:14566!1.14e-08!239;DOID:1749!3.68e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!6.12e-14!72;UBERON:0004119!1.29e-10!169;UBERON:0000925!1.29e-10!169;UBERON:0006595!1.29e-10!169;UBERON:0000065!2.47e-09!53;UBERON:0001007!2.69e-08!155;UBERON:0001555!2.69e-08!155;UBERON:0007026!2.69e-08!155;UBERON:0003729!1.97e-07!5;UBERON:0008947!2.68e-07!38;UBERON:0003258!2.68e-07!38;UBERON:0005153!3.14e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.51e-13;6!UBERON:0003293;2.51e-13;6!UBERON:0003294;2.51e-13;6!UBERON:0010047;2.51e-13;6!UBERON:0003408;2.51e-13;6!UBERON:0000167;2.51e-13;6!UBERON:0000161;5.09e-11;19!UBERON:0000166;5.09e-11;19!UBERON:0000165;1.83e-10;28!UBERON:0001911;2.91e-09;4!UBERON:0001708;4.22e-09;4!UBERON:0008895;4.22e-09;4!UBERON:0000365;1.41e-07;5!UBERON:0011159;1.89e-07;5!UBERON:0000486;9.81e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.62e-13,6;UBERON:0003293,2.62e-13,6;UBERON:0003294,2.62e-13,6;UBERON:0010047,2.62e-13,6;UBERON:0000167,2.62e-13,6;UBERON:0000165,4.63e-10,29;UBERON:0000930,4.63e-10,29;UBERON:0001004,8.64e-10,74;UBERON:0000166,1.84e-09,22;UBERON:0001911,2.91e-09,4;UBERON:0005333,2.91e-09,4;UBERON:0008425,2.91e-09,4;UBERON:0005311,2.91e-09,4;UBERON:0001708,3.04e-09,4;UBERON:0008895,3.04e-09,4;UBERON:0004119,4.34e-09,160;UBERON:0000925,4.34e-09,160;UBERON:0006595,4.34e-09,160;UBERON:0000033,1.42e-08,56;UBERON:0003102,1.86e-08,99;UBERON:0003408,3.47e-08,10;UBERON:0000161,5.03e-08,36;UBERON:0000153,1.22e-07,62;UBERON:0007811,1.22e-07,62;UBERON:0000365,1.32e-07,5;UBERON:0011159,1.46e-07,5 | |||
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| ||
|short_description=p@chr6:56484716..56484736,- | |||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56484716..56484736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56484716..56484736, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.46e-31 | 42 |
acinar cell of salivary gland | 5.28e-26 | 3 |
endodermal cell | 3.00e-22 | 58 |
epithelial cell of alimentary canal | 7.62e-20 | 20 |
respiratory epithelial cell | 4.63e-16 | 13 |
acinar cell | 7.41e-16 | 5 |
protein secreting cell | 2.62e-13 | 6 |
stratified squamous epithelial cell | 3.50e-13 | 6 |
keratin accumulating cell | 3.50e-13 | 6 |
stratified epithelial cell | 3.50e-13 | 6 |
keratinizing barrier epithelial cell | 3.50e-13 | 6 |
epithelial fate stem cell | 3.50e-13 | 6 |
stratified epithelial stem cell | 3.50e-13 | 6 |
surface ectodermal cell | 3.50e-13 | 6 |
epithelial cell of Malassez | 4.99e-12 | 3 |
epithelial cell | 3.74e-11 | 253 |
buccal mucosa cell | 5.31e-10 | 1 |
endothelial cell of viscerocranial mucosa | 5.31e-10 | 1 |
keratinized cell of the oral mucosa | 5.31e-10 | 1 |
general ecto-epithelial cell | 1.11e-09 | 14 |
transitional epithelial cell | 2.68e-09 | 4 |
urothelial cell | 2.68e-09 | 4 |
mammary gland epithelial cell | 2.91e-09 | 4 |
glandular epithelial cell | 4.81e-09 | 9 |
keratinocyte | 1.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.62e-13 | 6 |
gland of oral region | 2.62e-13 | 6 |
gland of foregut | 2.62e-13 | 6 |
oral gland | 2.62e-13 | 6 |
oral cavity | 2.62e-13 | 6 |
mouth | 4.63e-10 | 29 |
stomodeum | 4.63e-10 | 29 |
respiratory system | 8.64e-10 | 74 |
oral opening | 1.84e-09 | 22 |
mammary gland | 2.91e-09 | 4 |
mammary bud | 2.91e-09 | 4 |
mammary ridge | 2.91e-09 | 4 |
mammary placode | 2.91e-09 | 4 |
jaw skeleton | 3.04e-09 | 4 |
splanchnocranium | 3.04e-09 | 4 |
endoderm-derived structure | 4.34e-09 | 160 |
endoderm | 4.34e-09 | 160 |
presumptive endoderm | 4.34e-09 | 160 |
head | 1.42e-08 | 56 |
surface structure | 1.86e-08 | 99 |
gland of gut | 3.47e-08 | 10 |
orifice | 5.03e-08 | 36 |
anterior region of body | 1.22e-07 | 62 |
craniocervical region | 1.22e-07 | 62 |
urothelium | 1.32e-07 | 5 |
primary subdivision of cranial skeletal system | 1.46e-07 | 5 |