FFCP PHASE1:Hg19::chr6:56484716..56484736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:56484716..56484736,- | |||
|coexpression_cluster_id=C457 | |||
|description=CAGE_peak_at_chr6:56484716..56484736,- | |||
|id=chr6:56484716..56484736,- | |||
|ontology_enrichment_celltype=CL:0002076!9.04e-14!43;CL:0000223!1.16e-13!59;CL:0000066!1.15e-12!254;CL:0002368!2.46e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.00e-27;42!CL:0002623;4.84e-26;3!CL:0002251;6.59e-20;20!CL:0002368;4.08e-16;13!CL:0000622;7.04e-16;5!CL:0000154;2.51e-13;6!CL:0000240;3.29e-13;6!CL:0000311;3.29e-13;6!CL:0000079;3.29e-13;6!CL:0000237;3.29e-13;6!CL:0002166;7.77e-12;3!CL:0002336;5.54e-10;1!CL:0002261;5.54e-10;1!CL:0002170;5.54e-10;1!CL:0002159;1.27e-09;14!CL:0000244;2.91e-09;4!CL:0002327;2.91e-09;4!CL:0000731;2.91e-09;4!CL:0000150;4.68e-09;9!CL:0000312;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.46e-31,42;CL:0002623,5.28e-26,3;CL:0000223,3.00e-22,58;CL:0002251,7.62e-20,20;CL:0002368,4.63e-16,13;CL:0000622,7.41e-16,5;CL:0000154,2.62e-13,6;CL:0000240,3.50e-13,6;CL:0000311,3.50e-13,6;CL:0000079,3.50e-13,6;CL:0000237,3.50e-13,6;CL:0000036,3.50e-13,6;CL:0000357,3.50e-13,6;CL:0000114,3.50e-13,6;CL:0002166,4.99e-12,3;CL:0000066,3.74e-11,253;CL:0002336,5.31e-10,1;CL:0002261,5.31e-10,1;CL:0002170,5.31e-10,1;CL:0002159,1.11e-09,14;CL:0000244,2.68e-09,4;CL:0000731,2.68e-09,4;CL:0002327,2.91e-09,4;CL:0000150,4.81e-09,9;CL:0000312,1.50e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;3.29e-13;6!CL:0000114;3.29e-13;6!CL:0000223;2.10e-10;58 | |||
|ontology_enrichment_disease=DOID:162!2.92e-09!235;DOID:0050687!4.54e-09!143;DOID:305!4.69e-09!106;DOID:14566!1.14e-08!239;DOID:1749!3.68e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!6.12e-14!72;UBERON:0004119!1.29e-10!169;UBERON:0000925!1.29e-10!169;UBERON:0006595!1.29e-10!169;UBERON:0000065!2.47e-09!53;UBERON:0001007!2.69e-08!155;UBERON:0001555!2.69e-08!155;UBERON:0007026!2.69e-08!155;UBERON:0003729!1.97e-07!5;UBERON:0008947!2.68e-07!38;UBERON:0003258!2.68e-07!38;UBERON:0005153!3.14e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.51e-13;6!UBERON:0003293;2.51e-13;6!UBERON:0003294;2.51e-13;6!UBERON:0010047;2.51e-13;6!UBERON:0003408;2.51e-13;6!UBERON:0000167;2.51e-13;6!UBERON:0000161;5.09e-11;19!UBERON:0000166;5.09e-11;19!UBERON:0000165;1.83e-10;28!UBERON:0001911;2.91e-09;4!UBERON:0001708;4.22e-09;4!UBERON:0008895;4.22e-09;4!UBERON:0000365;1.41e-07;5!UBERON:0011159;1.89e-07;5!UBERON:0000486;9.81e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.62e-13,6;UBERON:0003293,2.62e-13,6;UBERON:0003294,2.62e-13,6;UBERON:0010047,2.62e-13,6;UBERON:0000167,2.62e-13,6;UBERON:0000165,4.63e-10,29;UBERON:0000930,4.63e-10,29;UBERON:0001004,8.64e-10,74;UBERON:0000166,1.84e-09,22;UBERON:0001911,2.91e-09,4;UBERON:0005333,2.91e-09,4;UBERON:0008425,2.91e-09,4;UBERON:0005311,2.91e-09,4;UBERON:0001708,3.04e-09,4;UBERON:0008895,3.04e-09,4;UBERON:0004119,4.34e-09,160;UBERON:0000925,4.34e-09,160;UBERON:0006595,4.34e-09,160;UBERON:0000033,1.42e-08,56;UBERON:0003102,1.86e-08,99;UBERON:0003408,3.47e-08,10;UBERON:0000161,5.03e-08,36;UBERON:0000153,1.22e-07,62;UBERON:0007811,1.22e-07,62;UBERON:0000365,1.32e-07,5;UBERON:0011159,1.46e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0,0,0.600182192168805,0,0.515281080091258,0,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0,0,1.09098448236334,0.286804595389004,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,2.71428225511403,3.88871469665824,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,1.6798212819886,1.98485136139341,1.52249488594842,2.3250715081117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,7.09023614806402,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,2.80984356113663,2.11409074101617,2.80747967488085,4.95673126192195,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0.384888450902048,0,0,0.0941438007767792,0,1.68471475667626,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.20453736500431,0.246169610922139,0.311039587661807,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0.682760689712998,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0,1.81250867562184,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.693373365065693,0,0.195984794828755,0.174118413160805,0.17472666824203,0.687944129886466,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0,0,0,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0.707082103850386,0.135904206073614,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.332787154610557,0,0.553394539744923,0.874862855734746,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0.463044948647668,0.734210113519403,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0,0.256241518587947,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0.422624246717254,0,0,0,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.588886311006154,0.353909170043221,7.52057253938884,0.693153996902029,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,1.27762427639595,0,0.336283722218824,0,0,0,0,0.342976018874837,0.135939465953663,0,0.236387681767936,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,1.60342272946051,3.31545862660859,6.65802060666405,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0,0,0.439762066981716,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0.357107877211315,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr6:56484716..56484736,- | |||
}} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56484716..56484736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56484716..56484736, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.46e-31 | 42 |
acinar cell of salivary gland | 5.28e-26 | 3 |
endodermal cell | 3.00e-22 | 58 |
epithelial cell of alimentary canal | 7.62e-20 | 20 |
respiratory epithelial cell | 4.63e-16 | 13 |
acinar cell | 7.41e-16 | 5 |
protein secreting cell | 2.62e-13 | 6 |
stratified squamous epithelial cell | 3.50e-13 | 6 |
keratin accumulating cell | 3.50e-13 | 6 |
stratified epithelial cell | 3.50e-13 | 6 |
keratinizing barrier epithelial cell | 3.50e-13 | 6 |
epithelial fate stem cell | 3.50e-13 | 6 |
stratified epithelial stem cell | 3.50e-13 | 6 |
surface ectodermal cell | 3.50e-13 | 6 |
epithelial cell of Malassez | 4.99e-12 | 3 |
epithelial cell | 3.74e-11 | 253 |
buccal mucosa cell | 5.31e-10 | 1 |
endothelial cell of viscerocranial mucosa | 5.31e-10 | 1 |
keratinized cell of the oral mucosa | 5.31e-10 | 1 |
general ecto-epithelial cell | 1.11e-09 | 14 |
transitional epithelial cell | 2.68e-09 | 4 |
urothelial cell | 2.68e-09 | 4 |
mammary gland epithelial cell | 2.91e-09 | 4 |
glandular epithelial cell | 4.81e-09 | 9 |
keratinocyte | 1.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.62e-13 | 6 |
gland of oral region | 2.62e-13 | 6 |
gland of foregut | 2.62e-13 | 6 |
oral gland | 2.62e-13 | 6 |
oral cavity | 2.62e-13 | 6 |
mouth | 4.63e-10 | 29 |
stomodeum | 4.63e-10 | 29 |
respiratory system | 8.64e-10 | 74 |
oral opening | 1.84e-09 | 22 |
mammary gland | 2.91e-09 | 4 |
mammary bud | 2.91e-09 | 4 |
mammary ridge | 2.91e-09 | 4 |
mammary placode | 2.91e-09 | 4 |
jaw skeleton | 3.04e-09 | 4 |
splanchnocranium | 3.04e-09 | 4 |
endoderm-derived structure | 4.34e-09 | 160 |
endoderm | 4.34e-09 | 160 |
presumptive endoderm | 4.34e-09 | 160 |
head | 1.42e-08 | 56 |
surface structure | 1.86e-08 | 99 |
gland of gut | 3.47e-08 | 10 |
orifice | 5.03e-08 | 36 |
anterior region of body | 1.22e-07 | 62 |
craniocervical region | 1.22e-07 | 62 |
urothelium | 1.32e-07 | 5 |
primary subdivision of cranial skeletal system | 1.46e-07 | 5 |