FFCP PHASE1:Hg19::chr6:75836108..75836130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75836108..75836130,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_at_chr6:75836108..75836130,- | |description=CAGE_peak_at_chr6:75836108..75836130,- | ||
|id=chr6:75836108..75836130,- | |id=chr6:75836108..75836130,- | ||
|ontology_enrichment_celltype=CL:0000057!5.18e-15!75;CL:0000055!2.78e-12!180;CL:0002620!1.23e-11!23;CL:0000136!4.86e-08!15;CL:0000499!3.89e-07!27 | |ontology_enrichment_celltype=CL:0000057!5.18e-15!75;CL:0000055!2.78e-12!180;CL:0002620!1.23e-11!23;CL:0000136!4.86e-08!15;CL:0000499!3.89e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.75e-18;23!CL:0002580;5.33e-15;3!CL:0002615;6.90e-15;3!CL:0000136;6.81e-13;13!CL:0000153;1.27e-12;9!CL:0000447;1.27e-12;9!CL:0000138;1.34e-12;6!CL:0002617;7.56e-11;2!CL:0002334;7.34e-10;12!CL:0002579;1.78e-07;3!CL:0000327;1.83e-07;15!CL:0000057;2.24e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.33e-19,15;CL:0002620,3.69e-18,23;CL:0000057,1.10e-15,76;CL:0002580,2.97e-15,3;CL:0002615,4.33e-15,3;CL:0000153,1.05e-12,9;CL:0000447,1.05e-12,9;CL:0000058,1.23e-12,6;CL:0000138,1.23e-12,6;CL:0002617,7.40e-11,2;CL:0002334,5.50e-10,12;CL:0000134,2.59e-09,354;CL:0002320,5.53e-09,361;CL:0000219,7.92e-08,386;CL:0000048,9.17e-08,427;CL:0000723,1.51e-07,433;CL:0002579,1.62e-07,3;CL:0000327,1.64e-07,15;CL:0000034,2.90e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.73e-08!5;DOID:450!9.73e-08!5;DOID:66!9.73e-08!5;DOID:423!9.73e-08!5;DOID:0080000!9.73e-08!5;DOID:11722!9.73e-08!5 | |ontology_enrichment_disease=DOID:17!9.73e-08!5;DOID:450!9.73e-08!5;DOID:66!9.73e-08!5;DOID:423!9.73e-08!5;DOID:0080000!9.73e-08!5;DOID:11722!9.73e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;5.53e-15;5!DOID:450;5.53e-15;5!DOID:66;5.53e-15;5!DOID:423;5.53e-15;5!DOID:0080000;5.53e-15;5!DOID:11722;5.53e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.63e-15,5;DOID:450,4.63e-15,5;DOID:66,4.63e-15,5;DOID:423,4.63e-15,5;DOID:0080000,4.63e-15,5;DOID:11722,4.63e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.45e-10!40;UBERON:0003102!8.84e-10!95;UBERON:0003688!2.50e-09!6;UBERON:0002358!2.50e-09!6;UBERON:0003684!2.50e-09!6;UBERON:0001178!2.50e-09!6;UBERON:0002199!2.51e-09!45;UBERON:0002416!2.51e-09!45;UBERON:0004457!5.69e-07!12;UBERON:0000042!5.69e-07!12 | |ontology_enrichment_uberon=UBERON:0002097!3.45e-10!40;UBERON:0003102!8.84e-10!95;UBERON:0003688!2.50e-09!6;UBERON:0002358!2.50e-09!6;UBERON:0003684!2.50e-09!6;UBERON:0001178!2.50e-09!6;UBERON:0002199!2.51e-09!45;UBERON:0002416!2.51e-09!45;UBERON:0004457!5.69e-07!12;UBERON:0000042!5.69e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.47e-20;6!UBERON:0002358;6.47e-20;6!UBERON:0003684;6.47e-20;6!UBERON:0001178;6.47e-20;6!UBERON:0004457;1.78e-18;9!UBERON:0000042;1.78e-18;9!UBERON:0000310;6.55e-12;10!UBERON:0001443;8.45e-11;11!UBERON:0002097;1.40e-08;41!UBERON:0002199;3.51e-07;46!UBERON:0002416;3.51e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.92e-20,6;UBERON:0002358,3.92e-20,6;UBERON:0003684,3.92e-20,6;UBERON:0001178,3.92e-20,6;UBERON:0004457,7.06e-14,12;UBERON:0000042,7.06e-14,12;UBERON:0000310,4.89e-12,10;UBERON:0002097,2.10e-11,41;UBERON:0001443,6.49e-11,11;UBERON:0002199,6.23e-10,46;UBERON:0002416,6.23e-10,46;UBERON:0002384,1.55e-08,371 | |||
|phase1_expression=3.63356758541113,5.35251309727458,1.9733616573436,8.00586386825043,2.23480547213644,9.59572376510406,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.994192127183747,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,2.00535164254356,4.20054904986389,0,1.45990461090791,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,2.33206526395521,2.77624605464138,1.27159140695737,0.900273288253207,1.23663035086127,5.15281080091258,1.67505170698431,0.506328996723799,0.389748020644795,1.51460264546469,2.20919756741518,1.13152239773168,1.42003837006646,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.831883446123229,1.24900292158013,0.630809660135739,0.585707074963566,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,1.98486246255021,4.29693525206575,7.85848264412606,0.896974044789907,2.55853624533352,8.36440389946759,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.330037999682352,0,0.650060246036521,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0.435050081742686,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953150969619124,0,0,0,0,0.359744915166629,1.09814811894422,0.471249609382746,0,0,0,0,0.731140468893853,0,0.272999822815972,1.69686518344455,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0.392996164052485,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,2.05095700524602,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0.189403005275089,1.0062716070103,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,1.03018711554838,1.01024846629776,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0.617602894321944,0.219284049578707,0.176689145945881,0,0.337884881306145,0,0.690860683462397,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3687002508852,0,0,0.159633859057151,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57992527250127,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 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| ||
|short_description=p@chr6:75836108..75836130,- | |short_description=p@chr6:75836108..75836130,- | ||
}} | }} |
Latest revision as of 03:13, 31 July 2015
Short description: | p@chr6:75836108..75836130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75836108..75836130, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.33e-19 | 15 |
skin fibroblast | 3.69e-18 | 23 |
fibroblast | 1.10e-15 | 76 |
preadipocyte of the breast | 2.97e-15 | 3 |
adipocyte of omentum tissue | 4.33e-15 | 3 |
GAG secreting cell | 1.05e-12 | 9 |
carbohydrate secreting cell | 1.05e-12 | 9 |
chondroblast | 1.23e-12 | 6 |
chondrocyte | 1.23e-12 | 6 |
adipocyte of breast | 7.40e-11 | 2 |
preadipocyte | 5.50e-10 | 12 |
mesenchymal cell | 2.59e-09 | 354 |
connective tissue cell | 5.53e-09 | 361 |
motile cell | 7.92e-08 | 386 |
multi fate stem cell | 9.17e-08 | 427 |
somatic stem cell | 1.51e-07 | 433 |
omentum preadipocyte | 1.62e-07 | 3 |
extracellular matrix secreting cell | 1.64e-07 | 15 |
stem cell | 2.90e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.92e-20 | 6 |
peritoneum | 3.92e-20 | 6 |
abdominal cavity | 3.92e-20 | 6 |
visceral peritoneum | 3.92e-20 | 6 |
cavity lining | 7.06e-14 | 12 |
serous membrane | 7.06e-14 | 12 |
breast | 4.89e-12 | 10 |
skin of body | 2.10e-11 | 41 |
chest | 6.49e-11 | 11 |
integument | 6.23e-10 | 46 |
integumental system | 6.23e-10 | 46 |
connective tissue | 1.55e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.63e-15 | 5 |
myotonic disease | 4.63e-15 | 5 |
muscle tissue disease | 4.63e-15 | 5 |
myopathy | 4.63e-15 | 5 |
muscular disease | 4.63e-15 | 5 |
myotonic dystrophy | 4.63e-15 | 5 |