FFCP PHASE1:Hg19::chr6:75848596..75848625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75848596..75848625,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_at_chr6:75848596..75848625,- | |description=CAGE_peak_at_chr6:75848596..75848625,- | ||
|id=chr6:75848596..75848625,- | |id=chr6:75848596..75848625,- | ||
|ontology_enrichment_celltype=CL:0000057!1.03e-16!75;CL:0002620!2.30e-11!23;CL:0000055!2.86e-11!180;CL:0002334!1.56e-08!12;CL:0000499!9.61e-07!27 | |ontology_enrichment_celltype=CL:0000057!1.03e-16!75;CL:0002620!2.30e-11!23;CL:0000055!2.86e-11!180;CL:0002334!1.56e-08!12;CL:0000499!9.61e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.38e-22;12!CL:0002620;2.09e-21;23!CL:0002580;7.11e-18;3!CL:0002615;9.41e-18;3!CL:0002579;1.69e-17;3!CL:0000136;2.73e-15;13!CL:0000153;5.87e-15;9!CL:0000447;5.87e-15;9!CL:0000138;1.11e-14;6!CL:0002617;2.14e-12;2!CL:0000057;8.22e-10;73!CL:0000327;6.97e-09;15!CL:0000499;1.17e-08;28!CL:0000135;3.00e-08;3!CL:0000388;3.00e-08;3!CL:0000346;6.50e-08;3!CL:1000428;6.50e-08;3!CL:0002616;3.94e-07;1!CL:0002581;4.56e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-24,76;CL:0002334,3.08e-22,12;CL:0002620,1.67e-21,23;CL:0002580,8.67e-18,3;CL:0002615,1.15e-17,3;CL:0002579,2.24e-17,3;CL:0000153,5.00e-15,9;CL:0000447,5.00e-15,9;CL:0000058,9.64e-15,6;CL:0000138,9.64e-15,6;CL:0000136,4.04e-13,15;CL:0002617,2.40e-12,2;CL:0000134,1.88e-11,354;CL:0002320,4.20e-11,361;CL:0000219,7.21e-10,386;CL:0000327,6.35e-09,15;CL:0000499,1.03e-08,28;CL:0000048,2.35e-08,427;CL:0000135,2.55e-08,3;CL:0000388,2.55e-08,3;CL:0000723,3.80e-08,433;CL:0000346,5.85e-08,3;CL:1000428,5.85e-08,3;CL:0000034,7.08e-08,441;CL:0002616,3.95e-07,1;CL:0002581,4.43e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.31e-07!5;DOID:450!9.31e-07!5;DOID:66!9.31e-07!5;DOID:423!9.31e-07!5;DOID:0080000!9.31e-07!5;DOID:11722!9.31e-07!5 | |ontology_enrichment_disease=DOID:17!9.31e-07!5;DOID:450!9.31e-07!5;DOID:66!9.31e-07!5;DOID:423!9.31e-07!5;DOID:0080000!9.31e-07!5;DOID:11722!9.31e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.47e-10;5!DOID:450;2.47e-10;5!DOID:66;2.47e-10;5!DOID:423;2.47e-10;5!DOID:0080000;2.47e-10;5!DOID:11722;2.47e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.55e-10,5;DOID:450,2.55e-10,5;DOID:66,2.55e-10,5;DOID:423,2.55e-10,5;DOID:0080000,2.55e-10,5;DOID:11722,2.55e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.03e-09!95;UBERON:0002097!1.38e-08!40;UBERON:0002199!1.43e-08!45;UBERON:0002416!1.43e-08!45;UBERON:0003688!1.81e-08!6;UBERON:0002358!1.81e-08!6;UBERON:0003684!1.81e-08!6;UBERON:0001178!1.81e-08!6;UBERON:0004923!5.37e-07!57 | |ontology_enrichment_uberon=UBERON:0003102!1.03e-09!95;UBERON:0002097!1.38e-08!40;UBERON:0002199!1.43e-08!45;UBERON:0002416!1.43e-08!45;UBERON:0003688!1.81e-08!6;UBERON:0002358!1.81e-08!6;UBERON:0003684!1.81e-08!6;UBERON:0001178!1.81e-08!6;UBERON:0004923!5.37e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.86e-33;6!UBERON:0002358;1.86e-33;6!UBERON:0003684;1.86e-33;6!UBERON:0001178;1.86e-33;6!UBERON:0004457;7.86e-30;9!UBERON:0000042;7.86e-30;9!UBERON:0000310;3.85e-14;10!UBERON:0002097;4.70e-13;41!UBERON:0001443;7.83e-13;11!UBERON:0005406;1.57e-12;2!UBERON:0002199;2.20e-10;46!UBERON:0002416;2.20e-10;46!UBERON:0003102;2.06e-08;50!UBERON:0007846;3.00e-08;3!UBERON:0000043;3.00e-08;3!UBERON:0007845;3.00e-08;3!UBERON:0000412;6.50e-08;3!UBERON:0001992;6.50e-08;3!UBERON:0002384;3.54e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.99e-33,6;UBERON:0002358,2.99e-33,6;UBERON:0003684,2.99e-33,6;UBERON:0001178,2.99e-33,6;UBERON:0004457,4.65e-22,12;UBERON:0000042,4.65e-22,12;UBERON:0002097,2.33e-16,41;UBERON:0002199,2.51e-14,46;UBERON:0002416,2.51e-14,46;UBERON:0000310,4.47e-14,10;UBERON:0001443,8.98e-13,11;UBERON:0005406,1.53e-12,2;UBERON:0002384,1.26e-10,371;UBERON:0004923,1.60e-09,66;UBERON:0007846,2.55e-08,3;UBERON:0000043,2.55e-08,3;UBERON:0007845,2.55e-08,3;UBERON:0000412,5.85e-08,3;UBERON:0001992,5.85e-08,3 | |||
|phase1_expression=2.36181893051724,8.56402095563933,2.53717927372748,8.00586386825043,4.02264984984559,5.23403114460221,0,0,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,4.20054904986389,0.795285947051099,2.91980922181582,0.0945348171640679,0,0.702678285545008,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0.206651562351531,3.56400857184616,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,2.87023417102179,2.56268866582281,1.05965950579781,0.600182192168805,0.92747276314595,3.60696756063881,1.67505170698431,1.18143432568886,1.16924406193438,1.7670364197088,1.56484827691909,0.646584227275248,2.84007674013291,0.806016785821122,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.653638332277218,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.623912584592421,1.24900292158013,0.946214490203608,0.585707074963566,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,2.23297027036899,6.59886485138669,10.3844234940237,2.05022638809122,2.55853624533352,7.39928037260594,4.45254199334973,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0,0,0.275673144969061,0.322260734604821,0.145016693914229,0,0.356128142586949,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.823611089208164,0.706874414074119,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.491245205065606,0,0,0.211107635297664,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0.0897576444097721,0,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.292357268344742,0.246346371159628,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0,0.477890301491107,0,0.155262956876259,0,0.53168342911599,0.521745061811734,0.450772826991655,0.380805212168795,0,0.181848659202559,0.644463342254931,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0,0,0.911579868532147,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0.846774100381858,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0.8453114551668,1.18948980281472,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,4.83593523616777,1.38652688589425,0.432626562123789,0,0,0,0,0,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| ||
|short_description=p@chr6:75848596..75848625,- | |short_description=p@chr6:75848596..75848625,- | ||
}} | }} |
Latest revision as of 03:13, 31 July 2015
Short description: | p@chr6:75848596..75848625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75848596..75848625, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.01e-24 | 76 |
preadipocyte | 3.08e-22 | 12 |
skin fibroblast | 1.67e-21 | 23 |
preadipocyte of the breast | 8.67e-18 | 3 |
adipocyte of omentum tissue | 1.15e-17 | 3 |
omentum preadipocyte | 2.24e-17 | 3 |
GAG secreting cell | 5.00e-15 | 9 |
carbohydrate secreting cell | 5.00e-15 | 9 |
chondroblast | 9.64e-15 | 6 |
chondrocyte | 9.64e-15 | 6 |
fat cell | 4.04e-13 | 15 |
adipocyte of breast | 2.40e-12 | 2 |
mesenchymal cell | 1.88e-11 | 354 |
connective tissue cell | 4.20e-11 | 361 |
motile cell | 7.21e-10 | 386 |
extracellular matrix secreting cell | 6.35e-09 | 15 |
stromal cell | 1.03e-08 | 28 |
multi fate stem cell | 2.35e-08 | 427 |
fibrocyte | 2.55e-08 | 3 |
tendon cell | 2.55e-08 | 3 |
somatic stem cell | 3.80e-08 | 433 |
hair follicle dermal papilla cell | 5.85e-08 | 3 |
stem cell of epidermis | 5.85e-08 | 3 |
stem cell | 7.08e-08 | 441 |
perirenal adipocyte cell | 3.95e-07 | 1 |
perirenal preadipocyte | 4.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.99e-33 | 6 |
peritoneum | 2.99e-33 | 6 |
abdominal cavity | 2.99e-33 | 6 |
visceral peritoneum | 2.99e-33 | 6 |
cavity lining | 4.65e-22 | 12 |
serous membrane | 4.65e-22 | 12 |
skin of body | 2.33e-16 | 41 |
integument | 2.51e-14 | 46 |
integumental system | 2.51e-14 | 46 |
breast | 4.47e-14 | 10 |
chest | 8.98e-13 | 11 |
perirenal fat | 1.53e-12 | 2 |
connective tissue | 1.26e-10 | 371 |
organ component layer | 1.60e-09 | 66 |
dense regular connective tissue | 2.55e-08 | 3 |
tendon | 2.55e-08 | 3 |
regular connective tissue | 2.55e-08 | 3 |
dermal papilla | 5.85e-08 | 3 |
papillary layer of dermis | 5.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.55e-10 | 5 |
myotonic disease | 2.55e-10 | 5 |
muscle tissue disease | 2.55e-10 | 5 |
myopathy | 2.55e-10 | 5 |
muscular disease | 2.55e-10 | 5 |
myotonic dystrophy | 2.55e-10 | 5 |