FFCP PHASE1:Hg19::chr6:75865417..75865433,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:75865417..75865433,- to FFCP PHASE1:Hg19::chr6:75865417..75865433,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:75865417..75865433,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75865417..75865433,- | |||
|id=chr6:75865417..75865433,- | |||
|ontology_enrichment_celltype=CL:0000057!1.65e-15!75;CL:0000055!7.41e-15!180;CL:0002620!3.98e-10!23;CL:0002334!4.85e-10!12;CL:0000499!2.75e-08!27;CL:0000723!2.35e-07!436;CL:0000048!2.78e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.14e-22;23!CL:0002334;3.31e-18;12!CL:0000153;4.32e-13;9!CL:0000447;4.32e-13;9!CL:0002580;4.34e-12;3!CL:0002615;7.18e-12;3!CL:0002579;9.38e-12;3!CL:0000135;3.87e-11;3!CL:0000388;3.87e-11;3!CL:0000057;6.28e-10;73!CL:0000136;9.24e-10;13!CL:0000138;2.84e-09;6!CL:0002617;1.45e-08;2!CL:0000499;2.76e-08;28!CL:0000327;1.39e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.51e-26,76;CL:0002620,1.97e-22,23;CL:0002334,3.86e-18,12;CL:0000136,4.14e-14,15;CL:0000153,2.83e-13,9;CL:0000447,2.83e-13,9;CL:0002580,4.44e-12,3;CL:0002615,7.34e-12,3;CL:0002579,8.78e-12,3;CL:0000134,1.75e-11,354;CL:0000135,3.95e-11,3;CL:0000388,3.95e-11,3;CL:0002320,4.75e-11,361;CL:0000048,2.88e-10,427;CL:0000723,5.79e-10,433;CL:0000034,1.42e-09,441;CL:0000219,1.59e-09,386;CL:0000058,2.47e-09,6;CL:0000138,2.47e-09,6;CL:0002617,1.38e-08,2;CL:0000499,2.30e-08,28;CL:0000327,1.09e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.52e-08!14;DOID:17!7.01e-07!5;DOID:450!7.01e-07!5;DOID:66!7.01e-07!5;DOID:423!7.01e-07!5;DOID:0080000!7.01e-07!5;DOID:11722!7.01e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.51e-17;5!DOID:450;3.51e-17;5!DOID:66;3.51e-17;5!DOID:423;3.51e-17;5!DOID:0080000;3.51e-17;5!DOID:11722;3.51e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.48e-17,5;DOID:450,3.48e-17,5;DOID:66,3.48e-17,5;DOID:423,3.48e-17,5;DOID:0080000,3.48e-17,5;DOID:11722,3.48e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0004457!1.36e-08!12;UBERON:0000042!1.36e-08!12;UBERON:0003688!1.72e-08!6;UBERON:0002358!1.72e-08!6;UBERON:0003684!1.72e-08!6;UBERON:0001178!1.72e-08!6;UBERON:0002097!2.86e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.10e-24;9!UBERON:0000042;1.10e-24;9!UBERON:0003688;6.98e-22;6!UBERON:0002358;6.98e-22;6!UBERON:0003684;6.98e-22;6!UBERON:0001178;6.98e-22;6!UBERON:0007846;3.87e-11;3!UBERON:0000043;3.87e-11;3!UBERON:0007845;3.87e-11;3!UBERON:0002097;6.65e-10;41!UBERON:0002199;2.02e-09;46!UBERON:0002416;2.02e-09;46!UBERON:0000310;2.94e-09;10!UBERON:0001443;2.24e-08;11!UBERON:0005406;3.54e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.68e-22,6;UBERON:0002358,6.68e-22,6;UBERON:0003684,6.68e-22,6;UBERON:0001178,6.68e-22,6;UBERON:0004457,2.75e-18,12;UBERON:0000042,2.75e-18,12;UBERON:0002097,3.69e-13,41;UBERON:0002199,2.23e-11,46;UBERON:0002416,2.23e-11,46;UBERON:0002384,3.05e-11,371;UBERON:0007846,3.95e-11,3;UBERON:0000043,3.95e-11,3;UBERON:0007845,3.95e-11,3;UBERON:0000310,2.90e-09,10;UBERON:0001443,2.21e-08,11;UBERON:0005406,3.37e-08,2 | |||
|phase1_expression=4.54195948176392,11.9896293378951,4.22863212287913,7.00513088471913,4.91657203870017,4.36169262050184,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,1.50401373190767,4.49024208778554,0.795285947051099,1.45990461090791,0.378139268656271,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,1.97813543422845,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0,3.04962380671065,5.12537733164562,2.7551147150743,1.20036438433761,1.54578793857658,5.66809188100384,3.53622027030021,1.0126579934476,1.55899208257918,3.02920529092937,2.11714766877288,1.77810662500693,3.19508633264953,0.806016785821122,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.505754070234305,0,0.441175890929576,0.217879444092406,0,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.1466765716419,1.16344544182,0,0,1.32969058292435,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,1.66376689224646,3.03329280955175,0.788512075169673,0.819989904948992,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.907170879989041,4.46594054073798,10.5888761568763,15.7169652882521,2.94720043288112,6.65219423786715,9.00781958404202,2.96836132889982,0.154209693802656,0,0.0821271560138091,1.03850885836724,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.54941678891006,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.214840489736547,0.580066775656914,0,0.0890320356467374,0,0.384380134730212,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0.359744915166629,1.09814811894422,0.942499218765491,0,0,0,0,0.487426979262569,1.05650146756755,0.272999822815972,1.27264888758341,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0,1.68886108238131,3.29294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0,0,0.20453736500431,0,1.55519793830904,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,2.62066728448103,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0,0,0.677942222341597,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,1.017074150619,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,0.554805861502613,0.757612021100357,0.754703705257725,1.77962244319307,0,0.151230923763239,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.829412415681711,0.53168342911599,1.04349012362347,0.601030435988874,0.380805212168795,1.22061219961398,0.181848659202559,0.214821114084977,0.464033759878494,1.59238355479446,0.800055529326307,2.40376993627955,1.01024846629776,0,0,0.643324774124777,0,0,0,0.489473409012935,0.895444205407437,0.926404341482917,0.438568099157414,0.530067437837643,0.192914038270915,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,3.062454773532,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.514464028312255,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,1.52934403219035,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,7.43990036333503,1.38652688589425,2.59575937274273,0,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| ||
|short_description=p@chr6:75865417..75865433,- | |||
}} | }} |
Latest revision as of 03:14, 31 July 2015
Short description: | p@chr6:75865417..75865433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75865417..75865433, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.51e-26 | 76 |
skin fibroblast | 1.97e-22 | 23 |
preadipocyte | 3.86e-18 | 12 |
fat cell | 4.14e-14 | 15 |
GAG secreting cell | 2.83e-13 | 9 |
carbohydrate secreting cell | 2.83e-13 | 9 |
preadipocyte of the breast | 4.44e-12 | 3 |
adipocyte of omentum tissue | 7.34e-12 | 3 |
omentum preadipocyte | 8.78e-12 | 3 |
mesenchymal cell | 1.75e-11 | 354 |
fibrocyte | 3.95e-11 | 3 |
tendon cell | 3.95e-11 | 3 |
connective tissue cell | 4.75e-11 | 361 |
multi fate stem cell | 2.88e-10 | 427 |
somatic stem cell | 5.79e-10 | 433 |
stem cell | 1.42e-09 | 441 |
motile cell | 1.59e-09 | 386 |
chondroblast | 2.47e-09 | 6 |
chondrocyte | 2.47e-09 | 6 |
adipocyte of breast | 1.38e-08 | 2 |
stromal cell | 2.30e-08 | 28 |
extracellular matrix secreting cell | 1.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.68e-22 | 6 |
peritoneum | 6.68e-22 | 6 |
abdominal cavity | 6.68e-22 | 6 |
visceral peritoneum | 6.68e-22 | 6 |
cavity lining | 2.75e-18 | 12 |
serous membrane | 2.75e-18 | 12 |
skin of body | 3.69e-13 | 41 |
integument | 2.23e-11 | 46 |
integumental system | 2.23e-11 | 46 |
connective tissue | 3.05e-11 | 371 |
dense regular connective tissue | 3.95e-11 | 3 |
tendon | 3.95e-11 | 3 |
regular connective tissue | 3.95e-11 | 3 |
breast | 2.90e-09 | 10 |
chest | 2.21e-08 | 11 |
perirenal fat | 3.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.48e-17 | 5 |
myotonic disease | 3.48e-17 | 5 |
muscle tissue disease | 3.48e-17 | 5 |
myopathy | 3.48e-17 | 5 |
muscular disease | 3.48e-17 | 5 |
myotonic dystrophy | 3.48e-17 | 5 |