FFCP PHASE1:Hg19::chr7:100612141..100612155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100612141..100612155,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_at_chr7:100612141..100612155,- | |description=CAGE_peak_at_chr7:100612141..100612155,- | ||
|id=chr7:100612141..100612155,- | |id=chr7:100612141..100612155,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.05e-29;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.15e-45!11;UBERON:0001155!8.00e-36!9;UBERON:0000160!1.51e-34!27;UBERON:0005409!7.29e-27!35;UBERON:0001154!2.82e-21!1;UBERON:0001153!2.82e-21!1;UBERON:0004907!5.45e-17!5;UBERON:0004921!1.91e-09!129;UBERON:0004185!1.91e-09!129;UBERON:0001007!8.53e-08!155;UBERON:0001555!8.53e-08!155;UBERON:0007026!8.53e-08!155;UBERON:0000063!2.56e-07!97;UBERON:0004119!4.11e-07!169;UBERON:0000925!4.11e-07!169;UBERON:0006595!4.11e-07!169 | |ontology_enrichment_uberon=UBERON:0000059!2.15e-45!11;UBERON:0001155!8.00e-36!9;UBERON:0000160!1.51e-34!27;UBERON:0005409!7.29e-27!35;UBERON:0001154!2.82e-21!1;UBERON:0001153!2.82e-21!1;UBERON:0004907!5.45e-17!5;UBERON:0004921!1.91e-09!129;UBERON:0004185!1.91e-09!129;UBERON:0001007!8.53e-08!155;UBERON:0001555!8.53e-08!155;UBERON:0007026!8.53e-08!155;UBERON:0000063!2.56e-07!97;UBERON:0004119!4.11e-07!169;UBERON:0000925!4.11e-07!169;UBERON:0006595!4.11e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;3.20e-64;11!UBERON:0000160;1.85e-56;17!UBERON:0001155;1.59e-50;9!UBERON:0005409;2.60e-44;22!UBERON:0004921;5.02e-30;33!UBERON:0001154;2.05e-29;1!UBERON:0001153;2.05e-29;1!UBERON:0009854;2.05e-29;1!UBERON:0004907;1.36e-23;5!UBERON:0001555;6.93e-12;54!UBERON:0001007;2.94e-10;81!UBERON:0001052;1.96e-08;4!UBERON:0009856;2.18e-08;4!UBERON:0002108;5.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,2.99e-64,11;UBERON:0000160,1.85e-56,17;UBERON:0001155,1.49e-50,9;UBERON:0005409,2.92e-39,25;UBERON:0001154,1.78e-29,1;UBERON:0001153,1.78e-29,1;UBERON:0001045,1.78e-29,1;UBERON:0004907,1.28e-23,5;UBERON:0004921,8.24e-09,118;UBERON:0001052,1.96e-08,4;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0001046,6.01e-07,19;UBERON:0002108,6.04e-07,4 | |||
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|short_description=p@chr7:100612141..100612155,- | |short_description=p@chr7:100612141..100612155,- | ||
}} | }} |
Latest revision as of 04:12, 31 July 2015
Short description: | p@chr7:100612141..100612155, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100612141..100612155, - |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 2.99e-64 | 11 |
intestine | 1.85e-56 | 17 |
colon | 1.49e-50 | 9 |
gastrointestinal system | 2.92e-39 | 25 |
vermiform appendix | 1.78e-29 | 1 |
caecum | 1.78e-29 | 1 |
midgut | 1.78e-29 | 1 |
lower digestive tract | 1.28e-23 | 5 |
subdivision of digestive tract | 8.24e-09 | 118 |
rectum | 1.96e-08 | 4 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
hindgut | 6.01e-07 | 19 |
small intestine | 6.04e-07 | 4 |