FFCP PHASE1:Hg19::chr7:100806730..100806789,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100806730..100806789,+ to FFCP PHASE1:Hg19::chr7:100806730..100806789,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100806730..100806789,+ | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_at_chr7:100806730..100806789,+ | |||
|id=chr7:100806730..100806789,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.62e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.13e-08;7!CL:0000586;2.13e-08;7!CL:0000167;7.73e-08;1!CL:0000164;7.73e-08;1!CL:0000502;7.73e-08;1!CL:0000172;7.73e-08;1!CL:0000173;7.73e-08;1!CL:0002601;1.10e-07;1!CL:0002553;2.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.75e-08,7;CL:0000586,2.75e-08,7;CL:0000167,7.50e-08,1;CL:0000164,7.50e-08,1;CL:0000502,7.50e-08,1;CL:0000172,7.50e-08,1;CL:0000173,7.50e-08,1;CL:0002351,7.50e-08,1;CL:0002601,1.25e-07,1;CL:0002553,1.83e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.73e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!9.76e-15!143;DOID:305!5.46e-11!106;DOID:14566!1.61e-10!239;DOID:162!1.31e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.68e-14;2!DOID:4430;7.73e-08;1!DOID:3371;9.08e-08;1!DOID:4549;9.08e-08;1!DOID:5861;9.08e-08;1!DOID:6496;9.08e-08;1!DOID:2355;2.57e-07;1!DOID:3119;2.79e-07;14!DOID:3095;7.19e-07;22!DOID:2994;7.19e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.85e-14,2;DOID:4430,7.50e-08,1;DOID:3371,9.10e-08,1;DOID:4549,9.10e-08,1;DOID:5861,9.10e-08,1;DOID:6496,9.10e-08,1;DOID:0050687,1.01e-07,143;DOID:2355,1.95e-07,1;DOID:3119,2.49e-07,14;DOID:3095,8.13e-07,22;DOID:2994,8.13e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001950!8.45e-13!20;UBERON:0002619!2.98e-11!22;UBERON:0001049!4.02e-11!57;UBERON:0005068!4.02e-11!57;UBERON:0006241!4.02e-11!57;UBERON:0007135!4.02e-11!57;UBERON:0001893!7.27e-11!34;UBERON:0000073!7.30e-11!94;UBERON:0001016!7.30e-11!94;UBERON:0001017!9.36e-11!82;UBERON:0002616!1.84e-10!59;UBERON:0002780!2.92e-10!41;UBERON:0001890!2.92e-10!41;UBERON:0006240!2.92e-10!41;UBERON:0002791!4.62e-10!33;UBERON:0003080!7.29e-10!42;UBERON:0000955!8.36e-10!69;UBERON:0006238!8.36e-10!69;UBERON:0001869!8.38e-10!32;UBERON:0005743!8.72e-10!86;UBERON:0002020!1.18e-09!34;UBERON:0003528!1.18e-09!34;UBERON:0000956!2.14e-09!25;UBERON:0000203!2.14e-09!25;UBERON:0003075!1.28e-07!86;UBERON:0007284!1.28e-07!86;UBERON:0004121!3.37e-07!169;UBERON:0002346!6.70e-07!90;UBERON:0000924!9.66e-07!173;UBERON:0006601!9.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.10e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.63e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.82960559194393,0.132529768321485,0.69716365721711,1.7622379352613,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0,1.31843099381408,0,0,0,1.0077309914171,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0,0.341826167541004,0,0.179515288819544,0.217294743844016,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,2.67058417487502,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.687944129886466,0,0,0,0,3.44198894096851,0,0.274083849293502,0.596143835108969,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0.343609788497747,1.37275998289572,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,1.52411997718412,0,0,0,1.37539436597234,1.24632101408756,0,0,0.728994679896296,0,0,0.0524545881349981,0.422401346077626,0,0,0,0,0,0.542999601753713,0,0.653174720218818,1.19730191562487,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0,0,5.30771911395767,37.3959586943907,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.877136198314828,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0.139879507719444,0,0.511577485214607,2.58779547352036,0,0.873677105536111,0,0,0,0,0,0.23658523500376,1.60114149657094,0,0,0.385375350578757,2.8339315265117,0,0.41023272848151,0.756215088665154,0.414943514785307,0.645902582527404,0,0.196295437002051,0.11796972334774,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0,0.634158101939068,1.64092442705466,0,0,0,0,0,0,1.21393120847326,0.455324382702595,0,0,0,0.271878931907327,0.789273282754189,0.354581522651905,0,0,0.628462359664008,1.68163297988273,0,0,0.47775168788705,0,0,0.813689977576877,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,6.76432635548652,0.118920090777569,0,0.219881033490858,1.05673990496671,0,0,4.23285566725371,0,5.65623713043902,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.160482733378337,0,0,0.143339583151451,0,1.01987235286372,0.436350690340377,0,0,0,0,0.252332849670158,0,0,1.1218771271618,1.3360870263278,2.57305718697566,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.82960559194393,0.132529768321485,0.69716365721711,1.7622379352613,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0,1.31843099381408,0,0,0,1.0077309914171,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0,0.341826167541004,0,0.179515288819544,0.217294743844016,0,0.183195186803725,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,2.67058417487502,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.687944129886466,0,0,0,0,3.44198894096851,0,0.274083849293502,0.596143835108969,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0.343609788497747,1.37275998289572,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,1.52411997718412,0,0,0,1.37539436597234,1.24632101408756,0,0,0.728994679896296,0,0,0.0524545881349981,0.422401346077626,0,0,0,0,0,0.542999601753713,0,0.653174720218818,1.19730191562487,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0,0,5.30771911395767,37.3959586943907,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.877136198314828,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0.139879507719444,0,0.511577485214607,2.58779547352036,0,0.873677105536111,0,0,0,0,0,0.23658523500376,1.60114149657094,0,0,0.385375350578757,2.8339315265117,0,0.41023272848151,0.756215088665154,0.414943514785307,0.645902582527404,0,0.196295437002051,0.11796972334774,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,0,0.634158101939068,1.64092442705466,0,0,0,0,0,0,1.21393120847326,0.455324382702595,0,0,0,0.271878931907327,0.789273282754189,0.354581522651905,0,0,0.628462359664008,1.68163297988273,0,0,0.47775168788705,0,0,0.813689977576877,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,6.76432635548652,0.118920090777569,0,0.219881033490858,1.05673990496671,0,0,4.23285566725371,0,5.65623713043902,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0.160482733378337,0,0,0.143339583151451,0,1.01987235286372,0.436350690340377,0,0,0,0,0.252332849670158,0,0,1.1218771271618,1.3360870263278,2.57305718697566,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr7:100806730..100806789,+ | |||
}} | }} |
Latest revision as of 04:20, 31 July 2015
Short description: | p@chr7:100806730..100806789, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100806730..100806789, + |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.75e-08 | 7 |
germ cell | 2.75e-08 | 7 |
peptide hormone secreting cell | 7.50e-08 | 1 |
enteroendocrine cell | 7.50e-08 | 1 |
type D enteroendocrine cell | 7.50e-08 | 1 |
somatostatin secreting cell | 7.50e-08 | 1 |
pancreatic D cell | 7.50e-08 | 1 |
progenitor cell of endocrine pancreas | 7.50e-08 | 1 |
uterine smooth muscle cell | 1.25e-07 | 1 |
lung fibroblast | 1.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.85e-14 | 2 |
somatostatinoma | 7.50e-08 | 1 |
chondrosarcoma | 9.10e-08 | 1 |
extraosseous chondrosarcoma | 9.10e-08 | 1 |
myxoid chondrosarcoma | 9.10e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 9.10e-08 | 1 |
cell type cancer | 1.01e-07 | 143 |
anemia | 1.95e-07 | 1 |
gastrointestinal system cancer | 2.49e-07 | 14 |
germ cell and embryonal cancer | 8.13e-07 | 22 |
germ cell cancer | 8.13e-07 | 22 |