FFCP PHASE1:Hg19::chr7:105029212..105029219,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:105029212..105029219,- | |||
|description=CAGE_peak_at_chr7:105029212..105029219,- | |||
|id=chr7:105029212..105029219,- | |||
|ontology_enrichment_celltype=CL:0002139!7.14e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.24e-30;24!CL:0000071;2.09e-25;18!CL:0000115;4.37e-18;36!CL:0002618;3.63e-13;3!CL:0000213;4.07e-12;58!CL:0000215;4.07e-12;58!CL:0002543;1.97e-11;6!CL:0002078;2.28e-11;45!CL:1000413;4.17e-11;9!CL:0002544;6.99e-11;6!CL:0000076;5.69e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.49e-30,24;CL:0000071,2.19e-25,18;CL:0002546,2.19e-25,18;CL:0000115,8.67e-22,36;CL:0000213,2.88e-20,58;CL:0000215,2.88e-20,58;CL:0002078,1.01e-16,45;CL:0000076,1.98e-14,63;CL:0002618,7.32e-13,3;CL:0002543,3.13e-11,6;CL:1000413,3.32e-11,9;CL:0002544,4.77e-11,6;CL:0000222,2.21e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.09e-25;18 | |||
|ontology_enrichment_disease=DOID:162!6.63e-09!235;DOID:14566!8.88e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.09e-25;18!UBERON:0001986;2.09e-25;18!UBERON:0004852;2.09e-25;18!UBERON:0000487;2.34e-20;22!UBERON:0006914;1.25e-17;25!UBERON:0000490;2.58e-11;33!UBERON:0003915;4.17e-11;9!UBERON:0004700;4.17e-11;9!UBERON:0001917;4.17e-11;9!UBERON:0002066;4.58e-08;5!UBERON:0001638;1.27e-07;9!UBERON:0003920;1.27e-07;9!UBERON:0004582;1.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.19e-25,18;UBERON:0001986,2.19e-25,18;UBERON:0004852,2.19e-25,18;UBERON:0000487,2.44e-20,22;UBERON:0006914,1.29e-17,25;UBERON:0000055,1.64e-11,68;UBERON:0003915,3.32e-11,9;UBERON:0004700,3.32e-11,9;UBERON:0001917,3.32e-11,9;UBERON:0002049,1.43e-09,78;UBERON:0007798,1.43e-09,78;UBERON:0007500,7.72e-09,59;UBERON:0001981,7.72e-09,59;UBERON:0004537,7.72e-09,59;UBERON:0006965,7.72e-09,59;UBERON:0002066,6.91e-08,5;UBERON:0001638,1.71e-07,9;UBERON:0003920,1.71e-07,9;UBERON:0004582,1.71e-07,9 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0,0,0.547497700291537,0.502170558379211,0,0.246301768349837,0.236132343941038,0,0.383829398097213,0.154816123316076,0,0.90361775633475,0,0.232401601740905,0.853015394924529,0.293600439334847,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0.764546456250458,1.32171328579026,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0.25618263945135,0.130059347559878,0.328875809207352,0,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0,0.614843499851882,1.37528029272598,0,0,0,0,0.132957960518865,0,0,0,1.19257444420023,1.72046919021225,0,1.13061588384802,2.09749718104953,0,0.626984899610432,0.516833518338658,2.13459757612026,1.33888245105868,1.20848795132744,0.760272105718513,2.4406205754817,2.57364156242108,0,1.07159673940896,2.02076435363553,2.13961812918312,0,0,2.19842092716489,0,0,0,0,0.25326102332916,0.264818361626438,0.860509862246441,0,0,0,0,0.311211035399766,0.67355336034844,0.653847612453835,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0.340296549480063,0.538168907066586,0.213557388818567,0,0.600182192168805,0.206105058476878,0.515281080091258,0.18611685633159,0,0.292311015483596,0,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.193260853163297,0.818238361772504,0.286804595389004,0.243947412259191,0.132529768321485,0.348581828608555,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,1.01056513432752,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.290633938513962,0,0.492663237895943,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.336393253036082,0,0.5867062865676,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0.410952645100767,0.358121926479791,2.24170287987055,0.197030760201927,0.215627574859517,0.385029108839245,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,1.32845119707087,0.184369168541703,0.260650843404249,0,0,0,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,4.45254199334973,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0.231046011313244,0,1.46139224653261,0.211103257785751,0,0.850468526382578,1.0795795805107,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.640986253728404,0.082509499920588,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.322260734604821,0,0.170453254832202,0.178064071293475,0.165284915360978,1.53752053892085,0.510450849978337,0.809262246844399,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.353437207037059,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.845086807596724,0,0,0.35667105148125,0,0,0.329294892959902,0,0.699869440489966,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,1.6023610669121,0,0.245040215981032,0.929015875628594,0,0.853702120180969,0.637705090915289,1.1974762285969,0.766021480529467,0.635020748171649,0,0.280797178113459,0,0.313359791546046,0,0.50787533340481,0,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.390776190804081,0,0,0,1.6653598399891,1.4098700508785,0,0,0,0.334330152832435,0.284136146806413,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0.276283915531148,0.251932747854276,0.20453736500431,0.123084805461069,0,0.629078458031288,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0.254253650292766,0.709163045303809,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0.21787692703798,0,0,0,1.1528195219403,0.0897576444097721,0.434589487688032,0,0.183195186803725,0,1.0219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| |||
|short_description=p@chr7:105029212..105029219,- | |||
}} |
Latest revision as of 04:37, 31 July 2015
Short description: | p@chr7:105029212..105029219, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:105029212..105029219, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.49e-30 | 24 |
blood vessel endothelial cell | 2.19e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.19e-25 | 18 |
endothelial cell | 8.67e-22 | 36 |
lining cell | 2.88e-20 | 58 |
barrier cell | 2.88e-20 | 58 |
meso-epithelial cell | 1.01e-16 | 45 |
squamous epithelial cell | 1.98e-14 | 63 |
endothelial cell of umbilical vein | 7.32e-13 | 3 |
vein endothelial cell | 3.13e-11 | 6 |
endothelial cell of artery | 3.32e-11 | 9 |
aortic endothelial cell | 4.77e-11 | 6 |
mesodermal cell | 2.21e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.19e-25 | 18 |
endothelium | 2.19e-25 | 18 |
cardiovascular system endothelium | 2.19e-25 | 18 |
simple squamous epithelium | 2.44e-20 | 22 |
squamous epithelium | 1.29e-17 | 25 |
vessel | 1.64e-11 | 68 |
endothelial tube | 3.32e-11 | 9 |
arterial system endothelium | 3.32e-11 | 9 |
endothelium of artery | 3.32e-11 | 9 |
vasculature | 1.43e-09 | 78 |
vascular system | 1.43e-09 | 78 |
epithelial tube open at both ends | 7.72e-09 | 59 |
blood vessel | 7.72e-09 | 59 |
blood vasculature | 7.72e-09 | 59 |
vascular cord | 7.72e-09 | 59 |
umbilical vein | 6.91e-08 | 5 |
vein | 1.71e-07 | 9 |
venous blood vessel | 1.71e-07 | 9 |
venous system | 1.71e-07 | 9 |