FFCP PHASE1:Hg19::chr7:105857768..105857771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:105857768..105857771,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr7:105857768..105857771,+ | |description=CAGE_peak_at_chr7:105857768..105857771,+ | ||
|id=chr7:105857768..105857771,+ | |id=chr7:105857768..105857771,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.52e-27!24;CL:0000071!5.80e-24!18;CL:0002546!5.80e-24!18;CL:0000115!1.65e-17!35;CL:0002078!4.89e-15!44;CL:1000413!5.27e-13!9;CL:0000213!1.06e-10!57;CL:0000215!1.06e-10!57;CL:0002544!2.53e-09!6;CL:0002543!5.93e-09!6 | |ontology_enrichment_celltype=CL:0002139!2.52e-27!24;CL:0000071!5.80e-24!18;CL:0002546!5.80e-24!18;CL:0000115!1.65e-17!35;CL:0002078!4.89e-15!44;CL:1000413!5.27e-13!9;CL:0000213!1.06e-10!57;CL:0000215!1.06e-10!57;CL:0002544!2.53e-09!6;CL:0002543!5.93e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.99e-21;13!CL:0000071;6.12e-15;18!CL:0002543;5.37e-12;6!CL:0002544;7.08e-12;6!CL:0002139;2.73e-11;24!CL:0002561;1.22e-09;2!CL:0002596;1.64e-09;2!CL:1000413;3.18e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.86e-18,15;CL:0000071,5.10e-15,18;CL:0002546,5.10e-15,18;CL:0002543,5.08e-12,6;CL:0002544,5.68e-12,6;CL:0002139,2.38e-11,24;CL:0002561,1.22e-09,2;CL:0002596,1.86e-09,2;CL:1000413,2.75e-08,9;CL:0000115,1.17e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;6.12e-15;18!UBERON:0006241;9.37e-07;3!UBERON:0003057;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.12e-15;18!UBERON:0001986;6.12e-15;18!UBERON:0004852;6.12e-15;18!UBERON:0000487;2.75e-12;22!UBERON:0006914;7.49e-11;25!UBERON:0005933;1.22e-09;2!UBERON:0005942;1.22e-09;2!UBERON:0005932;1.22e-09;2!UBERON:0005396;1.64e-09;2!UBERON:0000490;4.31e-09;33!UBERON:0001638;2.65e-08;9!UBERON:0003920;2.65e-08;9!UBERON:0004582;2.65e-08;9!UBERON:0003915;3.18e-08;9!UBERON:0004700;3.18e-08;9!UBERON:0001917;3.18e-08;9!UBERON:0002240;9.37e-07;3!UBERON:0005174;9.37e-07;3!UBERON:0001137;9.37e-07;3 | |||
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| ||
|short_description=p@chr7:105857768..105857771,+ | |short_description=p@chr7:105857768..105857771,+ | ||
}} | }} |
Latest revision as of 04:40, 31 July 2015
Short description: | p@chr7:105857768..105857771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:105857768..105857771, + |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.86e-18 | 15 |
blood vessel endothelial cell | 5.10e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.10e-15 | 18 |
vein endothelial cell | 5.08e-12 | 6 |
aortic endothelial cell | 5.68e-12 | 6 |
endothelial cell of vascular tree | 2.38e-11 | 24 |
outer root sheath cell | 1.22e-09 | 2 |
smooth muscle cell of the carotid artery | 1.86e-09 | 2 |
endothelial cell of artery | 2.75e-08 | 9 |
endothelial cell | 1.17e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.10e-15 | 18 |
endothelium | 5.10e-15 | 18 |
cardiovascular system endothelium | 5.10e-15 | 18 |
simple squamous epithelium | 2.37e-12 | 22 |
squamous epithelium | 6.58e-11 | 25 |
hair root sheath | 1.22e-09 | 2 |
hair outer root sheath | 1.22e-09 | 2 |
bulb of hair follicle | 1.22e-09 | 2 |
carotid artery segment | 1.86e-09 | 2 |
vein | 2.55e-08 | 9 |
venous blood vessel | 2.55e-08 | 9 |
venous system | 2.55e-08 | 9 |
endothelial tube | 2.75e-08 | 9 |
arterial system endothelium | 2.75e-08 | 9 |
endothelium of artery | 2.75e-08 | 9 |
epithelial tube open at both ends | 5.12e-07 | 59 |
blood vessel | 5.12e-07 | 59 |
blood vasculature | 5.12e-07 | 59 |
vascular cord | 5.12e-07 | 59 |
spinal cord | 9.64e-07 | 3 |
dorsal region element | 9.64e-07 | 3 |
dorsum | 9.64e-07 | 3 |