FFCP PHASE1:Hg19::chr7:20581377..20581387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20581377..20581387,- | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_at_chr7:20581377..20581387,- | |description=CAGE_peak_at_chr7:20581377..20581387,- | ||
Latest revision as of 08:27, 31 July 2015
| Short description: | p@chr7:20581377..20581387, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr7:20581377..20581387, - |
| Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr7:20581377..20581387- |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intermediate monocyte | 4.43e-112 | 9 |
| CD14-positive, CD16-positive monocyte | 4.43e-112 | 9 |
| non-classical monocyte | 2.28e-85 | 3 |
| CD14-low, CD16-positive monocyte | 2.28e-85 | 3 |
| classical monocyte | 1.91e-24 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.91e-24 | 42 |
| defensive cell | 1.94e-21 | 48 |
| phagocyte | 1.94e-21 | 48 |
| monopoietic cell | 3.20e-17 | 59 |
| monocyte | 3.20e-17 | 59 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.74e-13 | 76 |
| bone element | 1.58e-12 | 82 |
| skeletal element | 1.90e-11 | 90 |
| immune system | 4.34e-11 | 93 |
| hematopoietic system | 1.54e-10 | 98 |
| blood island | 1.54e-10 | 98 |
| skeletal system | 2.46e-10 | 100 |
| hemolymphoid system | 1.37e-09 | 108 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| non-Hodgkin lymphoma | 2.37e-29 | 1 |
| cutaneous T cell lymphoma | 2.37e-29 | 1 |
| mycosis fungoides | 2.37e-29 | 1 |
Showing 1 to 3 of 3 entries
