Personal tools

FFCP PHASE1:Hg19::chr7:25702754..25702765,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-81bp_to_ENST00000446840,uc003sxp.1_5end
|association_with_transcript=-81bp_to_ENST00000446840,uc003sxp.1_5end
|cluster_id=chr7:25702754..25702765,-
|coexpression_cluster_id=C791
|coexpression_cluster_id=C791
|description=CAGE_peak_3_at_ENST00000446840_5end,CAGE_peak_3_at_uc003sxp.1_5end
|description=CAGE_peak_3_at_ENST00000446840_5end,CAGE_peak_3_at_uc003sxp.1_5end
|id=chr7:25702754..25702765,-
|id=chr7:25702754..25702765,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0007297;3.96e-66;2!UBERON:0006298;5.05e-34;1!UBERON:0005754;7.06e-34;1
|ontology_enrichment_disease=DOID:3371!4.85e-10!1;DOID:4549!4.85e-10!1;DOID:5861!4.85e-10!1;DOID:6496!4.85e-10!1;DOID:5662!6.33e-10!1
|ontology_enrichment_disease=DOID:3371!4.85e-10!1;DOID:4549!4.85e-10!1;DOID:5861!4.85e-10!1;DOID:6496!4.85e-10!1;DOID:5662!6.33e-10!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006947!9.35e-28!3;UBERON:0004054!9.35e-28!3;UBERON:0005904!5.54e-21!4;UBERON:0003135!3.22e-20!11;UBERON:0001829!7.03e-19!2;UBERON:0007023!1.52e-14!115;UBERON:0003101!4.18e-14!22;UBERON:0000079!4.18e-14!22;UBERON:0001044!4.32e-14!6;UBERON:0003293!4.32e-14!6;UBERON:0003294!4.32e-14!6;UBERON:0010047!4.32e-14!6;UBERON:0000167!4.32e-14!6;UBERON:0001000!1.65e-10!1;UBERON:0005352!1.65e-10!1;UBERON:0001301!1.98e-10!1;UBERON:0001736!2.16e-10!1;UBERON:0006298!2.16e-10!1;UBERON:0000998!2.37e-10!1;UBERON:0006868!2.37e-10!1;UBERON:0007029!2.59e-10!1;UBERON:0001831!3.10e-10!1;UBERON:0001567!3.10e-10!1;UBERON:0008801!3.10e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0003408!1.17e-08!10
|ontology_enrichment_uberon=UBERON:0006947!9.35e-28!3;UBERON:0004054!9.35e-28!3;UBERON:0005904!5.54e-21!4;UBERON:0003135!3.22e-20!11;UBERON:0001829!7.03e-19!2;UBERON:0007023!1.52e-14!115;UBERON:0003101!4.18e-14!22;UBERON:0000079!4.18e-14!22;UBERON:0001044!4.32e-14!6;UBERON:0003293!4.32e-14!6;UBERON:0003294!4.32e-14!6;UBERON:0010047!4.32e-14!6;UBERON:0000167!4.32e-14!6;UBERON:0001000!1.65e-10!1;UBERON:0005352!1.65e-10!1;UBERON:0001301!1.98e-10!1;UBERON:0001736!2.16e-10!1;UBERON:0006298!2.16e-10!1;UBERON:0000998!2.37e-10!1;UBERON:0006868!2.37e-10!1;UBERON:0007029!2.59e-10!1;UBERON:0001831!3.10e-10!1;UBERON:0001567!3.10e-10!1;UBERON:0008801!3.10e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0003408!1.17e-08!10
|ontology_enrichment_uberon_v019=UBERON:0006947;1.11e-98;3!UBERON:0004054;1.11e-98;3!UBERON:0005904;2.58e-74;4!UBERON:0001000;1.84e-34;1!UBERON:0005352;1.84e-34;1!UBERON:0001301;3.61e-34;1!UBERON:0001736;5.05e-34;1!UBERON:0000998;7.06e-34;1!UBERON:0006868;7.06e-34;1!UBERON:0007029;9.85e-34;1!UBERON:0000058;2.27e-30;10!UBERON:0003135;1.07e-27;11!UBERON:0001044;5.43e-23;6!UBERON:0003293;5.43e-23;6!UBERON:0003294;5.43e-23;6!UBERON:0010047;5.43e-23;6!UBERON:0003408;5.43e-23;6!UBERON:0000167;5.43e-23;6!UBERON:0001829;9.07e-18;2!UBERON:0004175;6.23e-15;21!UBERON:0003101;2.73e-14;22!UBERON:0000079;2.73e-14;22!UBERON:0001041;1.81e-10;14!UBERON:0000014;1.70e-09;4!UBERON:0000161;5.73e-08;19!UBERON:0000166;5.73e-08;19
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.11e-98,3;UBERON:0004054,1.11e-98,3;UBERON:0005904,2.58e-74,4;UBERON:0001000,1.84e-34,1;UBERON:0005352,1.84e-34,1;UBERON:0001301,3.61e-34,1;UBERON:0001736,5.05e-34,1;UBERON:0006298,5.05e-34,1;UBERON:0000998,7.06e-34,1;UBERON:0006868,7.06e-34,1;UBERON:0007029,9.85e-34,1;UBERON:0003135,1.07e-27,11;UBERON:0001044,5.43e-23,6;UBERON:0003293,5.43e-23,6;UBERON:0003294,5.43e-23,6;UBERON:0010047,5.43e-23,6;UBERON:0000167,5.43e-23,6;UBERON:0001829,9.07e-18,2;UBERON:0000058,2.05e-16,19;UBERON:0000080,1.22e-15,9;UBERON:0002120,1.22e-15,9;UBERON:0004875,1.22e-15,9;UBERON:0005721,1.22e-15,9;UBERON:0005754,1.22e-15,9;UBERON:0007297,1.22e-15,9;UBERON:0003101,2.73e-14,22;UBERON:0000079,2.73e-14,22;UBERON:0003408,3.04e-14,10;UBERON:0004876,5.42e-13,11;UBERON:0004175,1.13e-12,25;UBERON:0003887,5.37e-12,12;UBERON:0000014,1.70e-09,4;UBERON:0002553,3.14e-09,61;UBERON:0007023,1.08e-07,114;UBERON:0000166,5.24e-07,22;UBERON:0003133,6.12e-07,48
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9942073082768,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,8.21215340737542,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945668487590378,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0463660469678,0,0,5.92741870267301,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9942073082768,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,8.21215340737542,0,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945668487590378,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0463660469678,0,0,5.92741870267301,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42220996766357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@ENST00000446840,p3@uc003sxp.1
|short_description=p3@ENST00000446840,p3@uc003sxp.1
}}
}}

Latest revision as of 08:49, 31 July 2015

Short description:p3@ENST00000446840, p3@uc003sxp.1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_ENST00000446840_5end, CAGE_peak_3_at_uc003sxp.1_5end
Coexpression cluster:C791_salivary_epididymis_submaxillary_ductus_seminal_parotid_colon
Association with transcript: -81bp_to_ENST00000446840, uc003sxp.1_5end
EntrezGene:NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data