FFCP PHASE1:Hg19::chr7:45956964..45956971,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:45956964..45956971,+
|short_description=p@chr7:45956964..45956971,+
|description=CAGE_peak_at_chr7:45956964..45956971,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:45956964..45956971,+ | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45956964..45956971,+ | |||
|id=chr7:45956964..45956971,+ | |||
|ontology_enrichment_celltype=CL:0000499!2.21e-13!27;CL:0000667!2.39e-13!6;CL:0000058!2.39e-13!6;CL:0000138!2.39e-13!6;CL:0002620!3.45e-13!23;CL:0000153!2.16e-12!9;CL:0000447!2.16e-12!9;CL:0000327!2.53e-10!14;CL:0000057!4.13e-09!75;CL:0000055!6.60e-09!180;CL:0000515!5.95e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.49e-50;9!CL:0000447;1.49e-50;9!CL:0000138;4.21e-43;6!CL:0000327;1.22e-30;15!CL:0000499;1.03e-16;28!CL:0000151;6.88e-11;36!CL:0000214;9.90e-11;3!CL:0002595;6.04e-07;5!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.49e-50,9;CL:0000447,1.49e-50,9;CL:0000058,3.65e-43,6;CL:0000138,3.65e-43,6;CL:0000327,1.22e-30,15;CL:0000499,1.03e-16,28;CL:0000151,4.00e-13,36;CL:0000214,1.09e-10,3;CL:0002595,6.04e-07,5;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.32e-09!5;DOID:450!1.32e-09!5;DOID:66!1.32e-09!5;DOID:423!1.32e-09!5;DOID:0080000!1.32e-09!5;DOID:11722!1.32e-09!5;DOID:3350!9.78e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.00e-09!14;UBERON:0000158!2.00e-09!14;UBERON:0002097!2.56e-09!40;UBERON:0002199!5.82e-08!45;UBERON:0002416!5.82e-08!45;UBERON:0003124!6.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;9.90e-11;3!UBERON:0007616;9.90e-11;3!UBERON:0002217;9.90e-11;3!UBERON:0002018;9.90e-11;3!UBERON:0003834;6.04e-07;5!UBERON:0001533;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.09e-10,3;UBERON:0007616,1.09e-10,3;UBERON:0002217,1.09e-10,3;UBERON:0002018,1.09e-10,3;UBERON:0003834,6.04e-07,5;UBERON:0001533,6.04e-07,5 | |||
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| ||
|short_description=p@chr7:45956964..45956971,+ | |||
}} | }} |
Latest revision as of 10:26, 31 July 2015
Short description: | p@chr7:45956964..45956971, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45956964..45956971, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.49e-50 | 9 |
carbohydrate secreting cell | 1.49e-50 | 9 |
chondroblast | 3.65e-43 | 6 |
chondrocyte | 3.65e-43 | 6 |
extracellular matrix secreting cell | 1.22e-30 | 15 |
stromal cell | 1.03e-16 | 28 |
secretory cell | 4.00e-13 | 36 |
synovial cell | 1.09e-10 | 3 |
smooth muscle cell of the subclavian artery | 6.04e-07 | 5 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.09e-10 | 3 |
layer of synovial tissue | 1.09e-10 | 3 |
synovial joint | 1.09e-10 | 3 |
synovial membrane of synovial joint | 1.09e-10 | 3 |
thoracic segment blood vessel | 6.04e-07 | 5 |
subclavian artery | 6.04e-07 | 5 |