FFCP PHASE1:Hg19::chr7:73118172..73118185,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6804 | |EntrezGene=entrezgene:6804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11433 | |HGNC=HGNC:11433 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=199bp_to_ENST00000497980_5end | |association_with_transcript=199bp_to_ENST00000497980_5end | ||
|cluster_id=chr7:73118172..73118185,- | |||
|coexpression_cluster_id=C617 | |coexpression_cluster_id=C617 | ||
|description=CAGE_peak_3_at_STX1A_5end | |description=CAGE_peak_3_at_STX1A_5end | ||
Revision as of 11:28, 31 July 2015
| Short description: | p3@STX1A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_STX1A_5end |
| Coexpression cluster: | C617_mucinous_gall_signet_bile_maxillary_keratoacanthoma_Alveolar |
| Association with transcript: | 199bp_to_ENST00000497980_5end |
| EntrezGene: | 6804 |
| HGNC: | 11433 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@STX1A |
|---|
0
5
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35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| keratocyte | 5.70e-21 | 2 |
| migratory cranial neural crest cell | 5.70e-21 | 2 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| head connective tissue | 5.70e-21 | 2 |
| substantia propria of cornea | 5.70e-21 | 2 |
| stroma | 3.42e-11 | 4 |
| cornea | 3.42e-11 | 4 |
| eye surface | 3.42e-11 | 4 |
| optic eminence | 3.42e-11 | 4 |
| corneal primordium | 3.42e-11 | 4 |
| sympathetic nervous system | 3.49e-09 | 5 |
| autonomic nervous system | 3.49e-09 | 5 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| cystadenocarcinoma | 6.62e-41 | 1 |
| mucinous cystadenocarcinoma | 6.62e-41 | 1 |
| signet ring cell adenocarcinoma | 3.81e-21 | 2 |
| lung small cell carcinoma | 3.10e-11 | 4 |
| neuroendocrine tumor | 7.25e-08 | 6 |
| adenocarcinoma | 2.14e-07 | 25 |
| bronchus cancer | 5.70e-07 | 7 |
| bronchogenic carcinoma | 5.70e-07 | 7 |
Showing 1 to 8 of 8 entries
