FFCP PHASE1:Hg19::chr7:73477950..73477995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73477950..73477995,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_at_chr7:73477950..73477995,+ | |description=CAGE_peak_at_chr7:73477950..73477995,+ | ||
|id=chr7:73477950..73477995,+ | |id=chr7:73477950..73477995,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.03e-12!75;CL:0000055!8.60e-11!180;CL:0002620!2.09e-07!23 | |ontology_enrichment_celltype=CL:0000057!2.03e-12!75;CL:0000055!8.60e-11!180;CL:0002620!2.09e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002615;4.63e-15;3!CL:0002580;2.09e-14;3!CL:0000135;6.82e-14;3!CL:0000388;6.82e-14;3!CL:0002334;4.83e-13;12!CL:0000136;1.15e-12;13!CL:0002617;1.68e-10;2!CL:0002579;8.04e-07;3!CL:0000214;8.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.66e-15,3;CL:0002580,1.46e-14,3;CL:0000057,1.97e-14,76;CL:0000135,5.62e-14,3;CL:0000388,5.62e-14,3;CL:0002334,4.36e-13,12;CL:0000136,6.87e-11,15;CL:0002617,1.61e-10,2;CL:0000214,5.49e-07,3;CL:0002579,9.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.87e-08!5;DOID:450!7.87e-08!5;DOID:66!7.87e-08!5;DOID:423!7.87e-08!5;DOID:0080000!7.87e-08!5;DOID:11722!7.87e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!7.43e-11!6;UBERON:0002358!7.43e-11!6;UBERON:0003684!7.43e-11!6;UBERON:0001178!7.43e-11!6;UBERON:0004457!8.75e-11!12;UBERON:0000042!8.75e-11!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.56e-24;9!UBERON:0000042;4.56e-24;9!UBERON:0003688;3.09e-19;6!UBERON:0002358;3.09e-19;6!UBERON:0003684;3.09e-19;6!UBERON:0001178;3.09e-19;6!UBERON:0001443;1.84e-14;11!UBERON:0007846;6.82e-14;3!UBERON:0000043;6.82e-14;3!UBERON:0007845;6.82e-14;3!UBERON:0000310;1.96e-11;10!UBERON:0005406;2.21e-10;2!UBERON:0006915;8.04e-07;3!UBERON:0007616;8.04e-07;3!UBERON:0002217;8.04e-07;3!UBERON:0002018;8.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.90e-19,6;UBERON:0002358,3.90e-19,6;UBERON:0003684,3.90e-19,6;UBERON:0001178,3.90e-19,6;UBERON:0004457,6.98e-18,12;UBERON:0000042,6.98e-18,12;UBERON:0001443,1.24e-14,11;UBERON:0007846,5.62e-14,3;UBERON:0000043,5.62e-14,3;UBERON:0007845,5.62e-14,3;UBERON:0000310,1.62e-11,10;UBERON:0005406,1.93e-10,2;UBERON:0006915,5.49e-07,3;UBERON:0007616,5.49e-07,3;UBERON:0002217,5.49e-07,3;UBERON:0002018,5.49e-07,3;UBERON:0002097,6.32e-07,41 | |||
|phase1_expression=3.99692434395225,7.27941781229343,3.52386010239928,13.009528785907,14.7497161161005,6.10636966870258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0.50133791063589,0.579386075843295,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.860509862246441,0.354668382198357,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.23633464639278,0,0,0,0,0,0,4.90380473278431,1.95309476578576,0,1.97328599257748,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,1.03056216018252,0,0.337552664482532,0.68205903612839,1.26216887122057,0,0,1.42003837006646,1.30977727695932,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0.579125226670317,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.78428988797162,1.41932173530541,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,1.73675465473144,3.06923946576125,11.507063871756,0.256278298511402,2.55853624533352,1.28683136914886,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,1.89996871767898,2.96365403663912,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,1.34366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0,0.123935764259002,0,0.318004350653419,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0.509781344063451,0,0.322289439867886,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.5870805215462,1.48798007266701,1.38652688589425,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.186224142887574,0,0,0.808468755832877,0,0,0,0.0717222053926763,2.66128285236811,0,0,0,0,4.69281884806909,0.122241444182866,0.813792356631477,0,0,0 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|phase1_expression=3.99692434395225,7.27941781229343,3.52386010239928,13.009528785907,14.7497161161005,6.10636966870258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0.50133791063589,0.579386075843295,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.860509862246441,0.354668382198357,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.23633464639278,0,0,0,0,0,0,4.90380473278431,1.95309476578576,0,1.97328599257748,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,1.03056216018252,0,0.337552664482532,0.68205903612839,1.26216887122057,0,0,1.42003837006646,1.30977727695932,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0.579125226670317,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.78428988797162,1.41932173530541,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,1.73675465473144,3.06923946576125,11.507063871756,0.256278298511402,2.55853624533352,1.28683136914886,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,1.89996871767898,2.96365403663912,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,1.12990370390266,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,1.34366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0,0.123935764259002,0,0.318004350653419,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0.509781344063451,0,0.322289439867886,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.5870805215462,1.48798007266701,1.38652688589425,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.186224142887574,0,0,0.808468755832877,0,0,0,0.0717222053926763,2.66128285236811,0,0,0,0,4.69281884806909,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p@chr7:73477950..73477995,+ | |short_description=p@chr7:73477950..73477995,+ | ||
}} | }} |
Latest revision as of 11:31, 31 July 2015
Short description: | p@chr7:73477950..73477995, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73477950..73477995, + |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.66e-15 | 3 |
preadipocyte of the breast | 1.46e-14 | 3 |
fibroblast | 1.97e-14 | 76 |
fibrocyte | 5.62e-14 | 3 |
tendon cell | 5.62e-14 | 3 |
preadipocyte | 4.36e-13 | 12 |
fat cell | 6.87e-11 | 15 |
adipocyte of breast | 1.61e-10 | 2 |
synovial cell | 5.49e-07 | 3 |
omentum preadipocyte | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.90e-19 | 6 |
peritoneum | 3.90e-19 | 6 |
abdominal cavity | 3.90e-19 | 6 |
visceral peritoneum | 3.90e-19 | 6 |
cavity lining | 6.98e-18 | 12 |
serous membrane | 6.98e-18 | 12 |
chest | 1.24e-14 | 11 |
dense regular connective tissue | 5.62e-14 | 3 |
tendon | 5.62e-14 | 3 |
regular connective tissue | 5.62e-14 | 3 |
breast | 1.62e-11 | 10 |
perirenal fat | 1.93e-10 | 2 |
stratified squamous epithelium | 5.49e-07 | 3 |
layer of synovial tissue | 5.49e-07 | 3 |
synovial joint | 5.49e-07 | 3 |
synovial membrane of synovial joint | 5.49e-07 | 3 |
skin of body | 6.32e-07 | 41 |