FFCP PHASE1:Hg19::chr7:94057614..94057624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94057614..94057624,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr7:94057614..94057624,+ | |description=CAGE_peak_at_chr7:94057614..94057624,+ | ||
|id=chr7:94057614..94057624,+ | |id=chr7:94057614..94057624,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.59e-41!180;CL:0000057!1.78e-24!75;CL:0000680!2.60e-22!57;CL:0000056!2.60e-22!57;CL:0000355!2.60e-22!57;CL:0000187!2.75e-21!54;CL:0000183!1.98e-20!59;CL:0000393!2.26e-18!60;CL:0000211!2.26e-18!60;CL:0000192!1.28e-17!42;CL:0000514!1.28e-17!42;CL:0000048!4.44e-16!430;CL:0000723!3.89e-15!436;CL:0000034!6.17e-14!444;CL:0000359!1.37e-13!32;CL:0002620!6.56e-09!23;CL:0002334!1.16e-08!12;CL:0002494!3.25e-08!16;CL:0002371!5.98e-08!591;CL:0000499!1.21e-07!27;CL:0000327!1.87e-07!14 | |ontology_enrichment_celltype=CL:0000055!3.59e-41!180;CL:0000057!1.78e-24!75;CL:0000680!2.60e-22!57;CL:0000056!2.60e-22!57;CL:0000355!2.60e-22!57;CL:0000187!2.75e-21!54;CL:0000183!1.98e-20!59;CL:0000393!2.26e-18!60;CL:0000211!2.26e-18!60;CL:0000192!1.28e-17!42;CL:0000514!1.28e-17!42;CL:0000048!4.44e-16!430;CL:0000723!3.89e-15!436;CL:0000034!6.17e-14!444;CL:0000359!1.37e-13!32;CL:0002620!6.56e-09!23;CL:0002334!1.16e-08!12;CL:0002494!3.25e-08!16;CL:0002371!5.98e-08!591;CL:0000499!1.21e-07!27;CL:0000327!1.87e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.32e-09;23!CL:0000327;3.37e-09;15!CL:0000057;6.92e-09;73!CL:0000153;2.25e-08;9!CL:0000447;2.25e-08;9!CL:0000499;2.31e-08;28!CL:0000138;5.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-22,76;CL:0000048,4.19e-11,427;CL:0000723,1.34e-10,433;CL:0000034,5.93e-10,441;CL:0002620,1.59e-09,23;CL:0000327,3.71e-09,15;CL:0000136,1.22e-08,15;CL:0002320,2.66e-08,361;CL:0000499,3.01e-08,28;CL:0000153,3.29e-08,9;CL:0000447,3.29e-08,9;CL:0000134,1.33e-07,354;CL:0000058,8.38e-07,6;CL:0000138,8.38e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.06e-08;5!DOID:450;5.06e-08;5!DOID:66;5.06e-08;5!DOID:423;5.06e-08;5!DOID:0080000;5.06e-08;5!DOID:11722;5.06e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.22e-08,5;DOID:450,7.22e-08,5;DOID:66,7.22e-08,5;DOID:423,7.22e-08,5;DOID:0080000,7.22e-08,5;DOID:11722,7.22e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.83e-23!83;UBERON:0002329!1.83e-23!83;UBERON:0003077!1.83e-23!83;UBERON:0003059!1.83e-23!83;UBERON:0007282!1.83e-23!83;UBERON:0009618!1.83e-23!83;UBERON:0007285!1.83e-23!83;UBERON:0001134!1.89e-22!61;UBERON:0002036!1.89e-22!61;UBERON:0003082!1.89e-22!61;UBERON:0002385!3.52e-22!63;UBERON:0001015!3.52e-22!63;UBERON:0000383!3.52e-22!63;UBERON:0004290!1.24e-21!70;UBERON:0000486!1.02e-17!82;UBERON:0005256!1.53e-13!143;UBERON:0004872!1.32e-11!84;UBERON:0002100!3.85e-10!216;UBERON:0001637!1.46e-09!42;UBERON:0003509!1.46e-09!42;UBERON:0004572!1.46e-09!42;UBERON:0004573!1.02e-08!33;UBERON:0004571!1.02e-08!33;UBERON:0001013!1.18e-08!14;UBERON:0000475!2.86e-08!365;UBERON:0000948!3.38e-08!24;UBERON:0005498!3.38e-08!24;UBERON:0004140!3.38e-08!24;UBERON:0009881!3.38e-08!24;UBERON:0004141!3.38e-08!24;UBERON:0003084!3.38e-08!24;UBERON:0007005!3.38e-08!24;UBERON:0004139!3.38e-08!24;UBERON:0004291!3.38e-08!24;UBERON:0007100!5.02e-08!27;UBERON:0000490!1.08e-07!138;UBERON:0002199!1.37e-07!45;UBERON:0002416!1.37e-07!45;UBERON:0003102!3.85e-07!95;UBERON:0001981!4.13e-07!60;UBERON:0007500!4.13e-07!60;UBERON:0004537!4.13e-07!60;UBERON:0006965!4.13e-07!60;UBERON:0001009!7.48e-07!113;UBERON:0001135!8.50e-07!15 | |ontology_enrichment_uberon=UBERON:0000914!1.83e-23!83;UBERON:0002329!1.83e-23!83;UBERON:0003077!1.83e-23!83;UBERON:0003059!1.83e-23!83;UBERON:0007282!1.83e-23!83;UBERON:0009618!1.83e-23!83;UBERON:0007285!1.83e-23!83;UBERON:0001134!1.89e-22!61;UBERON:0002036!1.89e-22!61;UBERON:0003082!1.89e-22!61;UBERON:0002385!3.52e-22!63;UBERON:0001015!3.52e-22!63;UBERON:0000383!3.52e-22!63;UBERON:0004290!1.24e-21!70;UBERON:0000486!1.02e-17!82;UBERON:0005256!1.53e-13!143;UBERON:0004872!1.32e-11!84;UBERON:0002100!3.85e-10!216;UBERON:0001637!1.46e-09!42;UBERON:0003509!1.46e-09!42;UBERON:0004572!1.46e-09!42;UBERON:0004573!1.02e-08!33;UBERON:0004571!1.02e-08!33;UBERON:0001013!1.18e-08!14;UBERON:0000475!2.86e-08!365;UBERON:0000948!3.38e-08!24;UBERON:0005498!3.38e-08!24;UBERON:0004140!3.38e-08!24;UBERON:0009881!3.38e-08!24;UBERON:0004141!3.38e-08!24;UBERON:0003084!3.38e-08!24;UBERON:0007005!3.38e-08!24;UBERON:0004139!3.38e-08!24;UBERON:0004291!3.38e-08!24;UBERON:0007100!5.02e-08!27;UBERON:0000490!1.08e-07!138;UBERON:0002199!1.37e-07!45;UBERON:0002416!1.37e-07!45;UBERON:0003102!3.85e-07!95;UBERON:0001981!4.13e-07!60;UBERON:0007500!4.13e-07!60;UBERON:0004537!4.13e-07!60;UBERON:0006965!4.13e-07!60;UBERON:0001009!7.48e-07!113;UBERON:0001135!8.50e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.05e-10;9!UBERON:0000042;1.05e-10;9!UBERON:0003688;1.34e-09;6!UBERON:0002358;1.34e-09;6!UBERON:0003684;1.34e-09;6!UBERON:0001178;1.34e-09;6!UBERON:0002384;7.33e-08;198!UBERON:0001013;2.56e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.36e-09,6;UBERON:0002358,1.36e-09,6;UBERON:0003684,1.36e-09,6;UBERON:0001178,1.36e-09,6;UBERON:0002199,2.86e-09,46;UBERON:0002416,2.86e-09,46;UBERON:0002384,7.76e-09,371;UBERON:0002097,1.18e-08,41;UBERON:0001013,1.06e-07,14;UBERON:0004457,1.45e-07,12;UBERON:0000042,1.45e-07,12;UBERON:0003102,8.92e-07,99 | |||
|phase1_expression=1.81678379270557,4.28201047781966,2.53717927372748,2.00146596706261,3.5756887554183,1.74467704820074,5.06599756336621,1.89515962028049,0.522371256399677,0,0,0,0.791300934685361,0.74259811776028,0.662794751455832,2.6893005858071,1.80808358407193,0.730310090387373,2.92759679274304,0.492484232307152,0.408001382488506,0.940364164434263,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,1.0843174571537,3.00802746381534,4.05570253090306,3.1811437882044,7.78615792484217,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.13967460498122,1.32409180813219,6.02356903572509,0.709336764396714,0.560677600142307,1.06748995729705,2.4666754841716,0,0.808264032418128,0.653847612453835,1.96764655938411,2.88087962239999,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.309977343527296,8.31602000097437,2.71993622206413,0.910161361938026,0,0.168336113954066,0.375355559615893,0,1.31693286264251,2.75839016219118,2.25357088359895,1.02088964844019,2.69084453533293,2.77624605464138,3.17897851739343,4.80145753735044,1.03052529238439,2.57640540045629,1.30281799432113,2.86919764810153,1.94874010322397,1.51460264546469,1.19664868234989,1.77810662500693,8.16522062788213,1.61203357164224,0.508681776931463,0,0,0,0,0,0,0,0,0,0,9.00537313470039,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.1466765716419,1.16344544182,3.57656445851882,0.845302752556,1.06375246633948,1.04007436911366,0.514414748524284,1.41849132023278,0,1.42977993658148,1.62786481617433,3.29296134712308,0.65147236858747,1.06617584622764,0.791951872933429,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,1.01346914667305,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.34960640891054,0.500170521059677,0.813795071099207,6.86303843051664,10.5273103390325,5.04647728108591,3.04567678981054,1.80567659836631,0,1.03473071292505,0,0.737476674166813,0.60818530127658,1.56640925970192,1.37257369524342,0,0,0,0,1.66435439510497,1.20956117331872,2.97729369382532,2.76231551918512,6.17452207752762,5.25370511948374,1.53512174720011,5.30817939773905,4.45254199334973,0.771048469013278,0.887808626565635,0.328508624055237,0.519254429183621,0.232420756919918,0,0,0,0.803701137152247,0.910455840033585,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,3.21367859688319,0.290012154876366,0.308097234229289,0.460511024178389,0.689182862422653,0.644521469209642,0.725083469571143,0.170453254832202,1.24644849905432,0,0,0,0,0.929691098594572,9.12955805808856,0,1.23213432070436,0.532306030317022,0.869932992075073,0.55597265731176,0.286249773483982,0.372158369359667,0.949138274156178,0.953150969619124,0.511795582622668,0.855877976067841,1.27281299170375,0.78494864019923,0.719489830333259,1.37268514868027,0.824686816419805,0.808729926293264,3.17020642346017,0.842516912477962,0.975267478179181,1.46228093778771,1.05650146756755,0.545999645631943,1.83827061539827,2.26016233240486,0.551365343546124,1.32687795048244,0,4.05142873986681,6.55894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,1.07001315444375,0,2.32218398827431,3.95153871551882,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,3.42143546427988,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42062117839031,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,1.27134268827375,1.08599920350743,2.5926644736038,2.28611152076586,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79105763464249,3.03827302801392,0.554805861502613,0.568209015825267,0,0.889811221596536,0.457680136793847,0.907385542579434,2.95330681107283,0.73927574994817,0.796483835818512,0,0.621051827505038,0,1.59505028734797,1.5652351854352,2.4041217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| ||
|short_description=p@chr7:94057614..94057624,+ | |short_description=p@chr7:94057614..94057624,+ | ||
}} | }} |
Latest revision as of 12:46, 31 July 2015
Short description: | p@chr7:94057614..94057624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94057614..94057624, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.77e-22 | 76 |
multi fate stem cell | 4.19e-11 | 427 |
somatic stem cell | 1.34e-10 | 433 |
stem cell | 5.93e-10 | 441 |
skin fibroblast | 1.59e-09 | 23 |
extracellular matrix secreting cell | 3.71e-09 | 15 |
fat cell | 1.22e-08 | 15 |
connective tissue cell | 2.66e-08 | 361 |
stromal cell | 3.01e-08 | 28 |
GAG secreting cell | 3.29e-08 | 9 |
carbohydrate secreting cell | 3.29e-08 | 9 |
mesenchymal cell | 1.33e-07 | 354 |
chondroblast | 8.38e-07 | 6 |
chondrocyte | 8.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.36e-09 | 6 |
peritoneum | 1.36e-09 | 6 |
abdominal cavity | 1.36e-09 | 6 |
visceral peritoneum | 1.36e-09 | 6 |
integument | 2.86e-09 | 46 |
integumental system | 2.86e-09 | 46 |
connective tissue | 7.76e-09 | 371 |
skin of body | 1.18e-08 | 41 |
adipose tissue | 1.06e-07 | 14 |
cavity lining | 1.45e-07 | 12 |
serous membrane | 1.45e-07 | 12 |
surface structure | 8.92e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.22e-08 | 5 |
myotonic disease | 7.22e-08 | 5 |
muscle tissue disease | 7.22e-08 | 5 |
myopathy | 7.22e-08 | 5 |
muscular disease | 7.22e-08 | 5 |
myotonic dystrophy | 7.22e-08 | 5 |