FFCP PHASE1:Hg19::chr7:94060151..94060162,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:94060151..94060162,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr7:94060151..94060162,+ | |||
|id=chr7:94060151..94060162,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-35!180;CL:0000057!1.66e-25!75;CL:0000048!8.26e-18!430;CL:0000723!6.73e-17!436;CL:0000034!4.08e-16!444;CL:0002620!6.27e-12!23;CL:0000680!1.51e-11!57;CL:0000056!1.51e-11!57;CL:0000355!1.51e-11!57;CL:0000187!1.45e-10!54;CL:0000183!2.56e-10!59;CL:0000393!9.17e-10!60;CL:0000211!9.17e-10!60;CL:0002371!9.77e-10!591;CL:0002320!2.75e-09!365;CL:0002334!4.56e-09!12;CL:0000192!8.41e-09!42;CL:0000514!8.41e-09!42;CL:0000134!1.06e-08!358;CL:0000144!7.05e-08!625;CL:0000219!1.37e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.34e-10;55!CL:0002620;3.67e-09;23!CL:0000048;6.17e-09;58!CL:0000723;2.17e-08;61!CL:0002320;1.62e-07;188!CL:0002334;1.64e-07;12!CL:0000135;2.60e-07;3!CL:0000388;2.60e-07;3!CL:0002580;2.76e-07;3!CL:1000306;3.57e-07;4!CL:0002547;3.57e-07;4!CL:0002579;4.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.24e-17,76;CL:0000048,1.24e-09,427;CL:0002620,3.04e-09,23;CL:0000723,3.22e-09,433;CL:0000134,5.98e-09,354;CL:0002320,6.58e-09,361;CL:0000034,1.09e-08,441;CL:0002334,1.88e-07,12;CL:0002580,2.59e-07,3;CL:0000135,2.86e-07,3;CL:0000388,2.86e-07,3;CL:1000306,3.47e-07,4;CL:0002547,3.47e-07,4;CL:0002579,3.93e-07,3;CL:0000219,4.10e-07,386;CL:0000136,4.41e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.20e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.91e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.76e-12!61;UBERON:0002036!3.76e-12!61;UBERON:0003082!3.76e-12!61;UBERON:0004290!8.50e-12!70;UBERON:0000914!1.75e-11!83;UBERON:0002329!1.75e-11!83;UBERON:0003077!1.75e-11!83;UBERON:0003059!1.75e-11!83;UBERON:0007282!1.75e-11!83;UBERON:0009618!1.75e-11!83;UBERON:0007285!1.75e-11!83;UBERON:0002385!2.24e-11!63;UBERON:0001015!2.24e-11!63;UBERON:0000383!2.24e-11!63;UBERON:0002384!2.62e-10!375;UBERON:0000486!1.65e-09!82;UBERON:0003688!2.05e-07!6;UBERON:0002358!2.05e-07!6;UBERON:0003684!2.05e-07!6;UBERON:0001178!2.05e-07!6;UBERON:0002199!2.17e-07!45;UBERON:0002416!2.17e-07!45;UBERON:0000478!3.67e-07!24;UBERON:0002097!6.72e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.45e-12;6!UBERON:0002358;7.45e-12;6!UBERON:0003684;7.45e-12;6!UBERON:0001178;7.45e-12;6!UBERON:0004457;1.43e-07;9!UBERON:0000042;1.43e-07;9!UBERON:0002384;1.57e-07;198!UBERON:0007846;2.60e-07;3!UBERON:0000043;2.60e-07;3!UBERON:0007845;2.60e-07;3!UBERON:0004797;3.57e-07;4!UBERON:0000415;3.57e-07;4!UBERON:0007240;3.57e-07;4!UBERON:0005742;3.57e-07;4!UBERON:0005734;3.57e-07;4!UBERON:0004664;3.57e-07;4!UBERON:0004663;3.57e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.80e-12,6;UBERON:0002358,4.80e-12,6;UBERON:0003684,4.80e-12,6;UBERON:0001178,4.80e-12,6;UBERON:0002384,3.16e-09,371;UBERON:0002097,5.96e-08,41;UBERON:0007846,2.86e-07,3;UBERON:0000043,2.86e-07,3;UBERON:0007845,2.86e-07,3;UBERON:0000415,3.47e-07,4;UBERON:0007240,3.47e-07,4;UBERON:0005742,3.47e-07,4;UBERON:0005734,3.47e-07,4;UBERON:0004664,3.47e-07,4;UBERON:0004663,3.47e-07,4 | |||
|phase1_expression=5.81370813665781,3.63970890614671,8.88012745804618,3.00219895059391,1.78784437770915,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0.791300934685361,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,2.53007406669196,2.50668955317945,1.73815822752988,0.795285947051099,1.45990461090791,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,1.39293562831038,1.85372853138506,6.02356903572509,1.06400514659507,0,1.06748995729705,1.2333377420858,0.311211035399766,0.134710672069688,0.653847612453835,0.756787138224657,2.30470369792,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0.408308342509787,0.245668634623536,0,1.18800285728205,3.21447008062124,0.910161361938026,0,0,0,0,0.877955241761676,2.45190236639216,0.600952235626387,0.680593098960126,3.40840307808838,2.56268866582281,3.39091041855299,7.50227740211006,0.618315175430633,2.83404594050192,2.60563598864226,8.94514560878711,0.876933046450788,3.5340728394176,1.47279837827679,1.2931684545505,6.74518225781567,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,5.14592750554308,0,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,2.19761916788222,0,3.381211010224,0.531876233169741,0,0.257207374262142,0,0.266422179016099,2.00169191121407,5.42621605391443,0.823240336780769,0.325736184293735,1.77695974371273,0,0.602878754119172,0,0.099972991182057,0,0,0,1.4377491329495,2.29723871668228,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,4.57535895367776,5.70972764150918,3.15404830067869,2.22568688486155,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,1.37257369524342,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,7.93944985020086,6.1384789315225,8.98112302185835,12.5576366270587,3.58195074346692,5.95159508231348,0,0.462629081407967,0.887808626565635,0.739144404124282,1.03850885836724,0.697262270759755,0,0,0,0.574072240823034,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0,0.644521469209642,1.16013355131383,0,1.51354460599453,0,0,0,0,0.464845549297286,7.24068397710472,0,0.308033580176089,0,0,0.74129687641568,0.286249773483982,1.48863347743867,0.949138274156178,0.953150969619124,0.255897791311334,0,0,0,1.43897966066652,0.274537029736055,0.942499218765491,0.404364963146632,0,0,1.46290121726877,0.243713489631284,0,0.136499911407986,2.54529777516683,1.13008116620243,1.10273068709225,0,2.19225442626881,1.73632660280006,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0.7133421029625,0,0.633322905892992,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,1.18785872333055,1.22864280839693,0,0,0,0,0,0,0,0,0,0,4.3545542272653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61804353109152,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,1.62899880526114,0,0.326587360109409,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38807684618998,3.27198633786114,0.554805861502613,0.378806010550178,0.754703705257725,3.55924488638614,0.228840068396924,2.26846385644859,1.39893480524502,0.295710299979268,0.796483835818512,0.449803112163605,0.776314784381297,1.24411862352257,1.59505028734797,2.08698024724694,3.15540978894159,3.04644169735036,1.62748293281865,1.45478927362048,1.18151612746737,0.464033759878494,2.3885753321917,1.20008329398946,2.74716564146234,4.04099386519103,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,8.11154670488573,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0,0,2.66967466827017,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4383298820438,6.79995390282795,0,0,0,0,0,0,0,1.09279780251979,0,0,0,0,0,4.226557275834,1.18948980281472,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,1.0580536810308,8.18389039966853,5.0839319149456,9.08515780459957,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0.213233981900981,4.04709533488359,0,0.0620747142958579,0.112131862580613,0,2.02117188958219,0,2.39563310759697,0,0,3.65926392200615,0,0,0,0,7.03922827210363,0,2.44137706989443,0,0,0 | |||
|short_description=p@chr7:94060151..94060162,+ | |||
}} |
Latest revision as of 12:48, 31 July 2015
Short description: | p@chr7:94060151..94060162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94060151..94060162, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.24e-17 | 76 |
multi fate stem cell | 1.24e-09 | 427 |
skin fibroblast | 3.04e-09 | 23 |
somatic stem cell | 3.22e-09 | 433 |
mesenchymal cell | 5.98e-09 | 354 |
connective tissue cell | 6.58e-09 | 361 |
stem cell | 1.09e-08 | 441 |
preadipocyte | 1.88e-07 | 12 |
preadipocyte of the breast | 2.59e-07 | 3 |
fibrocyte | 2.86e-07 | 3 |
tendon cell | 2.86e-07 | 3 |
fibroblast of tunica adventitia of artery | 3.47e-07 | 4 |
fibroblast of the aortic adventitia | 3.47e-07 | 4 |
omentum preadipocyte | 3.93e-07 | 3 |
motile cell | 4.10e-07 | 386 |
fat cell | 4.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.80e-12 | 6 |
peritoneum | 4.80e-12 | 6 |
abdominal cavity | 4.80e-12 | 6 |
visceral peritoneum | 4.80e-12 | 6 |
connective tissue | 3.16e-09 | 371 |
skin of body | 5.96e-08 | 41 |
dense regular connective tissue | 2.86e-07 | 3 |
tendon | 2.86e-07 | 3 |
regular connective tissue | 2.86e-07 | 3 |
artery wall | 3.47e-07 | 4 |
tunica adventitia of artery | 3.47e-07 | 4 |
adventitia | 3.47e-07 | 4 |
tunica adventitia of blood vessel | 3.47e-07 | 4 |
aorta tunica adventitia | 3.47e-07 | 4 |
aorta wall | 3.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-08 | 14 |