FFCP PHASE1:Hg19::chr8:41161048..41161064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:41161048..41161064,- | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_at_chr8:41161048..41161064,- | |description=CAGE_peak_at_chr8:41161048..41161064,- | ||
|id=chr8:41161048..41161064,- | |id=chr8:41161048..41161064,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.43e-17;3!CL:0000067;1.43e-17;3!CL:0005012;1.43e-17;3!CL:0002304;1.43e-17;3!CL:0002616;3.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.69e-17,3;CL:0000067,1.69e-17,3;CL:0005012,1.69e-17,3;CL:0002304,1.69e-17,3;CL:0002616,3.52e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.56e-11;2!UBERON:0005795;2.30e-09;10!UBERON:0006298;6.23e-07;1!UBERON:0008801;6.23e-07;1!UBERON:0010227;6.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.92e-18;3!DOID:127;4.92e-18;3!DOID:0060072;1.18e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.16e-18,3;DOID:127,4.16e-18,3;DOID:0060072,1.04e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0005156!2.57e-08!59;UBERON:0000990!2.57e-08!59;UBERON:0000468!3.25e-08!659;UBERON:0004121!4.62e-08!169;UBERON:0000924!5.86e-08!173;UBERON:0006601!5.86e-08!173;UBERON:0000475!6.48e-08!365;UBERON:0000153!7.48e-08!129;UBERON:0007811!7.48e-08!129;UBERON:0000033!9.91e-08!123;UBERON:0000161!2.13e-07!35;UBERON:0007625!2.23e-07!11;UBERON:0001444!2.70e-07!48;UBERON:0000062!3.24e-07!511;UBERON:0003937!7.05e-07!12;UBERON:0005399!7.05e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.43e-17;3!UBERON:0001775;1.43e-17;3!UBERON:0000488;2.61e-13;4!UBERON:0001829;3.35e-12;2!UBERON:0002203;5.00e-09;6!UBERON:0001768;5.00e-09;6!UBERON:0002200;5.00e-09;6!UBERON:0007625;3.05e-08;11!UBERON:0006947;5.63e-08;3!UBERON:0004054;5.63e-08;3!UBERON:0005795;6.23e-07;1!UBERON:0002079;6.23e-07;1!UBERON:0001831;6.23e-07;1!UBERON:0001736;6.23e-07;1!UBERON:0001567;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.69e-17,3;UBERON:0001775,1.69e-17,3;UBERON:0000488,2.96e-13,4;UBERON:0001829,2.53e-12,2;UBERON:0002203,5.43e-09,6;UBERON:0001768,5.43e-09,6;UBERON:0002200,5.43e-09,6;UBERON:0007625,3.30e-08,11;UBERON:0006947,9.26e-08,3;UBERON:0004054,9.26e-08,3;UBERON:0004175,1.88e-07,25;UBERON:0001736,4.97e-07,1;UBERON:0006298,4.97e-07,1;UBERON:0001831,5.89e-07,1;UBERON:0001567,5.89e-07,1;UBERON:0008801,5.89e-07,1;UBERON:0002079,6.60e-07,1;UBERON:0007029,9.25e-07,1 | |||
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|phase1_expression=0.363356758541113,2.14100523890983,0.140954404095971,2.00146596706261,0.446961094427288,6.10636966870258,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,1.42800483870977,0.940364164434263,0.572471974262113,0.547497700291537,0.627713197974014,0,0,0.157421562627358,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,2.17430079477356,3.54767035940102,2.0202000709419,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.323745888736263,0.140450806702248,0,1.96534907698829,0.206651562351531,0,0.741800787835671,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.600182192168805,0.309157587715317,0,0,0.168776332241266,1.65642908774038,0,0,0.969876340912871,0,0.10075209822764,0,0,0,0,0,0.397589304964456,0.116193942869518,0.10366105501537,0.756962552626885,1.82488679537915,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.781952530212746,0,0.343143423810856,0,0,0,0,3.32870879020994,0,0,0,0.841980283299221,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0,0.164254312027618,3.63478100428535,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.114814448164607,1.45672934405374,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0.10115778085555,1.85938219718914,6.61105928344344,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,1.10273068709225,0.66343897524122,0.438450885253763,0,1.31178950409327,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0,0,0.615602068030377,0,0,0.0897576444097721,0,0,0.366390373607449,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.67569440763353,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0.592713324460491,0,0,0.482259445395058,1.65047323916681,4.15440338029185,0,0,0,0,0.157611414598396,0,0,0,0.191915197319445,2.1440859791201,0,0,13.0319904420891,2.5926644736038,14.6964312049234,0,0,0.170388021785422,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0.889811221596536,0,0.302461847526478,0.621748802331122,0,0,0,0.310525913752519,0,0.797525143673985,0,0,0,0.406870733204662,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.617602894321944,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,1.31017534008077,0,0,0.781078098613847,0,0,1.09394961803644,2.19303106742873,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.0657727735628491,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0.860454717640555,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,2.75237570042724,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0.252332849670158,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0.310298987585686,0.639701945702943,0.23806443146374,0,0,0,0,0.202117188958219,1.30630048738177,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0.244482888365733,2.44137706989443,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr8:41161048..41161064,- | |short_description=p@chr8:41161048..41161064,- | ||
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Latest revision as of 18:23, 31 July 2015
Short description: | p@chr8:41161048..41161064, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41161048..41161064, - |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ciliated cell | 1.69e-17 | 3 |
ciliated epithelial cell | 1.69e-17 | 3 |
multi-ciliated epithelial cell | 1.69e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.69e-17 | 3 |
perirenal adipocyte cell | 3.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.69e-17 | 3 |
ciliary body | 1.69e-17 | 3 |
atypical epithelium | 2.96e-13 | 4 |
major salivary gland | 2.53e-12 | 2 |
vasculature of eye | 5.43e-09 | 6 |
uvea | 5.43e-09 | 6 |
vasculature of head | 5.43e-09 | 6 |
pigment epithelium of eye | 3.30e-08 | 11 |
male genital duct | 9.26e-08 | 3 |
internal male genitalia | 9.26e-08 | 3 |
internal genitalia | 1.88e-07 | 25 |
submandibular gland | 4.97e-07 | 1 |
submandibular gland primordium | 4.97e-07 | 1 |
parotid gland | 5.89e-07 | 1 |
cheek | 5.89e-07 | 1 |
parotid gland primordium | 5.89e-07 | 1 |
left cardiac atrium | 6.60e-07 | 1 |
surface | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.16e-18 | 3 |
leiomyoma | 4.16e-18 | 3 |
benign neoplasm | 1.04e-13 | 4 |