FFCP PHASE1:Hg19::chr8:74498117..74498133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:74498117..74498133,- | |||
|coexpression_cluster_id=C495 | |||
|description=CAGE_peak_at_chr8:74498117..74498133,- | |||
|id=chr8:74498117..74498133,- | |||
|ontology_enrichment_celltype=CL:0000077!6.57e-15!19;CL:0000359!2.87e-12!32;CL:0000192!4.87e-10!42;CL:0000514!4.87e-10!42;CL:0000222!4.89e-09!119;CL:0002334!4.96e-09!12;CL:0000680!2.68e-07!57;CL:0000056!2.68e-07!57;CL:0000355!2.68e-07!57;CL:0000187!2.81e-07!54;CL:0000548!6.34e-07!679;CL:0000004!6.34e-07!679;CL:0000255!6.34e-07!679;CL:0000012!9.53e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.82e-26;19!CL:0002579;1.41e-11;3!CL:0002595;2.46e-11;5!CL:0000359;2.22e-08;32!CL:0002593;5.38e-08;2!CL:0002334;3.26e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.14e-26,19;CL:0002579,1.33e-11,3;CL:0002595,2.64e-11,5;CL:0000222,7.04e-09,121;CL:0000359,1.00e-08,32;CL:0002593,6.09e-08,2;CL:0002334,2.84e-07,12;CL:0000076,3.81e-07,63;CL:0000213,9.97e-07,58;CL:0000215,9.97e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.67e-14!14;DOID:193!2.67e-09!29;DOID:120!5.71e-09!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.29e-15;14!DOID:3350;6.08e-08;2!DOID:120;4.57e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.83e-15,14;DOID:3350,4.75e-08,2;DOID:120,4.43e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003688!9.66e-10!6;UBERON:0002358!9.66e-10!6;UBERON:0003684!9.66e-10!6;UBERON:0001178!9.66e-10!6;UBERON:0004573!4.30e-09!33;UBERON:0004571!4.30e-09!33;UBERON:0001637!3.70e-08!42;UBERON:0003509!3.70e-08!42;UBERON:0004572!3.70e-08!42;UBERON:0002323!1.25e-07!46;UBERON:0001135!1.26e-07!15;UBERON:0004458!7.54e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.60e-15;6!UBERON:0002358;8.60e-15;6!UBERON:0003684;8.60e-15;6!UBERON:0001178;8.60e-15;6!UBERON:0003834;2.46e-11;5!UBERON:0001533;2.46e-11;5!UBERON:0004457;9.39e-10;9!UBERON:0000042;9.39e-10;9!UBERON:0005406;2.27e-08;2!UBERON:0003513;4.12e-08;7!UBERON:0002456;5.38e-08;2!UBERON:0004573;4.81e-07;33!UBERON:0004571;4.81e-07;33!UBERON:0002118;7.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.01e-14,6;UBERON:0002358,1.01e-14,6;UBERON:0003684,1.01e-14,6;UBERON:0001178,1.01e-14,6;UBERON:0003834,2.64e-11,5;UBERON:0001533,2.64e-11,5;UBERON:0004573,1.96e-08,33;UBERON:0004571,1.96e-08,33;UBERON:0005406,2.32e-08,2;UBERON:0003513,4.33e-08,7;UBERON:0002456,6.09e-08,2;UBERON:0001637,1.37e-07,42;UBERON:0003509,1.37e-07,42;UBERON:0004572,1.37e-07,42;UBERON:0004457,3.40e-07,12;UBERON:0000042,3.40e-07,12;UBERON:0002118,7.45e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,2.11431606143957,2.00146596706261,0.446961094427288,6.10636966870258,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,2.25095607382472,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40194934417936,0.109750285408626,0,0.201057944823262,0,0,0,1.44331342025273,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0.766765358330422,4.43396914106349,0.880484340132261,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.77695974371273,0,14.1676507218005,17.4306691720059,22.4939230159628,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.07057393278297,1.10391690523754,2.6942525448324,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.98486246255021,0.61384789315225,0.561320188866147,7.81648810459776,3.58195074346692,3.21707842287215,4.45254199334973,0,0.532685175939381,0,0,0.116210378459959,0.120859449591622,1.20303882181971,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4615536859744,0,0,0,0,0,0,0,0,0,0,0,0,2.32422774648643,0,2.0911118104818,0.308033580176089,1.59691809095107,0,0,2.43312307461385,0.744316738719335,0,0.953150969619124,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,1.21856744815642,8.45201174054043,0,0,0,0,3.3171948762061,1.31535265576129,0,0,0.811641507850816,0,0,0,0.196498082026242,1.78335525740625,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.500547425135725,15.2402714413591,0,0,0,0,0,0,0,35.8013539161065,0,0,0,0,0,0,0,0.111308705022906,0,7.17826387635178,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,2.40780445460263,0,0,0,0,27.0063747675991,0,0.411125773940253,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0,1.19760786519031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.457680136793847,0,0,0,0.955780602982214,1.79921244865442,0.310525913752519,0.414706207840855,1.32920857278997,2.08698024724694,12.6216391557663,34.2724690951916,1.22061219961398,0,0.537052785212442,3.24823631914946,4.77715066438339,0,0,0,0,0,88.3499356464694,0.260994291965212,0,4.63044948647668,0,8.5962643719114,74.7299502129553,26.971938098181,0.883445729729405,54.401758792398,1.8583668471838,0,3.10887307558079,0,0,0,0,0,0,1.2288645437686,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1352810665982,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:74498117..74498133,- | |||
}} |
Latest revision as of 19:51, 31 July 2015
Short description: | p@chr8:74498117..74498133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:74498117..74498133, - |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.14e-26 | 19 |
omentum preadipocyte | 1.33e-11 | 3 |
smooth muscle cell of the subclavian artery | 2.64e-11 | 5 |
mesodermal cell | 7.04e-09 | 121 |
vascular associated smooth muscle cell | 1.00e-08 | 32 |
smooth muscle cell of the internal thoracic artery | 6.09e-08 | 2 |
preadipocyte | 2.84e-07 | 12 |
squamous epithelial cell | 3.81e-07 | 63 |
lining cell | 9.97e-07 | 58 |
barrier cell | 9.97e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.01e-14 | 6 |
peritoneum | 1.01e-14 | 6 |
abdominal cavity | 1.01e-14 | 6 |
visceral peritoneum | 1.01e-14 | 6 |
thoracic segment blood vessel | 2.64e-11 | 5 |
subclavian artery | 2.64e-11 | 5 |
systemic artery | 1.96e-08 | 33 |
systemic arterial system | 1.96e-08 | 33 |
perirenal fat | 2.32e-08 | 2 |
trunk blood vessel | 4.33e-08 | 7 |
internal thoracic artery | 6.09e-08 | 2 |
artery | 1.37e-07 | 42 |
arterial blood vessel | 1.37e-07 | 42 |
arterial system | 1.37e-07 | 42 |
cavity lining | 3.40e-07 | 12 |
serous membrane | 3.40e-07 | 12 |
right ovary | 7.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.83e-15 | 14 |
mesenchymal cell neoplasm | 4.75e-08 | 2 |
female reproductive organ cancer | 4.43e-07 | 27 |