FFCP PHASE1:Hg19::chr9:130304887..130304902,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130304887..130304902,- | |||
|coexpression_cluster_id=C4139 | |coexpression_cluster_id=C4139 | ||
|description=CAGE_peak_at_chr9:130304887..130304902,- | |description=CAGE_peak_at_chr9:130304887..130304902,- |
Latest revision as of 22:52, 31 July 2015
Short description: | p@chr9:130304887..130304902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130304887..130304902, - |
Coexpression cluster: | C4139_placenta_chorionic_mature_amniotic_Mast_Hepatocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr9:130304887..130304902- |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.42e-30 | 5 |
basophil mast progenitor cell | 1.42e-30 | 5 |
chorionic membrane mesenchymal stem cell | 2.63e-23 | 3 |
multinucleate cell | 1.44e-17 | 1 |
myotube | 1.44e-17 | 1 |
endocrine cell | 2.54e-17 | 9 |
extraembryonic cell | 2.62e-14 | 19 |
amnion mesenchymal stem cell | 4.11e-14 | 5 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.02e-29 | 14 |
membranous layer | 1.02e-29 | 14 |
egg chorion | 2.63e-23 | 3 |
chorion | 2.99e-22 | 7 |
extraembryonic structure | 2.07e-17 | 24 |
amnion | 2.35e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.55e-09 | 8 |
organ component layer | 7.37e-09 | 66 |
Showing 1 to 8 of 8 entries