FFCP PHASE1:Hg19::chr9:73216831..73216844,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:73216831..73216844,+
|short_description=p@chr9:73216831..73216844,+
|description=CAGE_peak_at_chr9:73216831..73216844,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:73216831..73216844,+ | |||
|description=CAGE_peak_at_chr9:73216831..73216844,+ | |||
|id=chr9:73216831..73216844,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.86e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.48e-14;19!CL:0000511;2.93e-12;1!CL:0002625;2.93e-12;1!CL:0000216;2.93e-12;1!CL:0000228;8.62e-12;1!CL:0002557;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002548;6.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.54e-14,19;CL:0000511,2.93e-12,1;CL:0002625,2.93e-12,1;CL:0000216,2.93e-12,1;CL:0000228,5.05e-12,1;CL:0002372,5.05e-12,1;CL:0002557,1.81e-11,1;CL:0002548,6.16e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.95e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.57e-11!27;UBERON:0000948!1.06e-08!24;UBERON:0005498!1.06e-08!24;UBERON:0004140!1.06e-08!24;UBERON:0009881!1.06e-08!24;UBERON:0004141!1.06e-08!24;UBERON:0003084!1.06e-08!24;UBERON:0007005!1.06e-08!24;UBERON:0004139!1.06e-08!24;UBERON:0004291!1.06e-08!24;UBERON:0000481!4.20e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.93e-12;1!UBERON:0001343;2.93e-12;1!UBERON:0004910;2.93e-12;1!UBERON:0004813;2.93e-12;1!UBERON:0001282;8.62e-12;1!UBERON:0007195;8.62e-12;1!UBERON:0009842;8.62e-12;1!UBERON:0003704;8.62e-12;1!UBERON:0001171;8.62e-12;1!UBERON:0001172;8.62e-12;1!UBERON:0004909;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.93e-12,1;UBERON:0001343,2.93e-12,1;UBERON:0004910,2.93e-12,1;UBERON:0005154,2.93e-12,1;UBERON:0005295,2.93e-12,1;UBERON:0004813,2.93e-12,1;UBERON:0005297,2.93e-12,1;UBERON:0005294,2.93e-12,1;UBERON:0010141,2.93e-12,1;UBERON:0005891,2.93e-12,1;UBERON:0001282,5.62e-12,1;UBERON:0009842,5.62e-12,1;UBERON:0003704,5.62e-12,1;UBERON:0001171,5.62e-12,1;UBERON:0001172,5.62e-12,1;UBERON:0007195,9.61e-12,1;UBERON:0004909,9.44e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.986680828671798,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.573673241497627,0,0.560677600142307,0,0.98667019366864,0.311211035399766,1.0776853765575,1.63461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.150238058906597,1.02088964844019,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.719792448923265,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,5.22920075160176,2.49932477955143,0,0,0,0.479249710983165,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,1.24782516918484,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.640695746278505,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,4.82051789532479,0,0.770243085573222,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.435753854075961,0,0,1.36730467016401,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,1.09633539717401,0,0.126621591911757,0,0.400794101257669,0.213452994739353,0.799238438328521,0,0,0,0,0,0,0,0.313808538937,0.203996435272644,0.288950589901519,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0.399358000997982,0.429226048136571,0.446342914883745,0.335917362433631,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0.170388021785422,0.453248366080503,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0.909894705249887,3.99651466962954,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0.457680136793847,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0,0,0,0.521745061811734,1.05180326298053,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.428883182749851,0,0.906823702049089,1.62065732026684,0.244736704506468,0,0,0.219284049578707,0,0.38582807654183,0,0,0,1.21543982470953,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.685952037749674,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.986680828671798,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.573673241497627,0,0.560677600142307,0,0.98667019366864,0.311211035399766,1.0776853765575,1.63461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.150238058906597,1.02088964844019,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.719792448923265,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,5.22920075160176,2.49932477955143,0,0,0,0.479249710983165,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,1.24782516918484,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.640695746278505,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,4.82051789532479,0,0.770243085573222,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.435753854075961,0,0,1.36730467016401,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,1.09633539717401,0,0.126621591911757,0,0.400794101257669,0.213452994739353,0.799238438328521,0,0,0,0,0,0,0,0.313808538937,0.203996435272644,0.288950589901519,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0.399358000997982,0.429226048136571,0.446342914883745,0.335917362433631,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0.170388021785422,0.453248366080503,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0.909894705249887,3.99651466962954,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0.457680136793847,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0,0,0,0.521745061811734,1.05180326298053,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.428883182749851,0,0.906823702049089,1.62065732026684,0.244736704506468,0,0,0.219284049578707,0,0.38582807654183,0,0,0,1.21543982470953,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.655087670040387,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.685952037749674,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr9:73216831..73216844,+ | |||
}} | }} |
Latest revision as of 02:31, 1 August 2015
Short description: | p@chr9:73216831..73216844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:73216831..73216844, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.54e-14 | 19 |
androgen binding protein secreting cell | 2.93e-12 | 1 |
seminiferous tubule epithelial cell | 2.93e-12 | 1 |
Sertoli cell | 2.93e-12 | 1 |
multinucleate cell | 5.05e-12 | 1 |
myotube | 5.05e-12 | 1 |
fibroblast of pulmonary artery | 1.81e-11 | 1 |
cardiac fibroblast | 6.16e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.93e-12 | 1 |
seminiferous tubule of testis | 2.93e-12 | 1 |
epithelium of male gonad | 2.93e-12 | 1 |
epithelial cord | 2.93e-12 | 1 |
sex cord | 2.93e-12 | 1 |
seminiferous tubule epithelium | 2.93e-12 | 1 |
testis sex cord | 2.93e-12 | 1 |
genital ridge | 2.93e-12 | 1 |
primitive sex cord of indifferent gonad | 2.93e-12 | 1 |
coelomic epithelium | 2.93e-12 | 1 |
intralobular bile duct | 5.62e-12 | 1 |
acinus | 5.62e-12 | 1 |
intrahepatic bile duct | 5.62e-12 | 1 |
portal lobule | 5.62e-12 | 1 |
hepatic acinus | 5.62e-12 | 1 |
stroma of bone marrow | 9.61e-12 | 1 |
epithelium of gonad | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.96e-07 | 2 |