FFCP PHASE1:Hg19::chr9:85499033..85499065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:85499033..85499065,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr9:85499033..85499065,+ | |description=CAGE_peak_at_chr9:85499033..85499065,+ | ||
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|ontology_enrichment_celltype=CL:0002322!2.21e-59!5;CL:0000540!2.62e-18!6;CL:0000031!2.62e-18!6;CL:0000404!2.62e-18!6;CL:0000047!6.88e-14!8;CL:0002561!6.06e-13!1;CL:0000148!2.38e-11!10;CL:0000541!2.38e-11!10;CL:0000147!2.95e-08!14;CL:0000039!8.94e-08!7;CL:0000586!8.94e-08!7;CL:0000221!2.57e-07!71 | |ontology_enrichment_celltype=CL:0002322!2.21e-59!5;CL:0000540!2.62e-18!6;CL:0000031!2.62e-18!6;CL:0000404!2.62e-18!6;CL:0000047!6.88e-14!8;CL:0002561!6.06e-13!1;CL:0000148!2.38e-11!10;CL:0000541!2.38e-11!10;CL:0000147!2.95e-08!14;CL:0000039!8.94e-08!7;CL:0000586!8.94e-08!7;CL:0000221!2.57e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.11e-98;5!CL:0002321;4.23e-33;15!CL:0000540;4.15e-30;6!CL:0000404;4.15e-30;6!CL:0000148;1.67e-18;10!CL:0000147;2.02e-13;14!CL:0000039;2.12e-12;7!CL:0000586;2.12e-12;7!CL:0000710;1.38e-09;20!CL:0000075;2.99e-07;27!CL:0002319;3.30e-07;25 | |ontology_enrichment_celltype_v019=CL:0002322;2.11e-98;5!CL:0002321;4.23e-33;15!CL:0000540;4.15e-30;6!CL:0000404;4.15e-30;6!CL:0000148;1.67e-18;10!CL:0000147;2.02e-13;14!CL:0000039;2.12e-12;7!CL:0000586;2.12e-12;7!CL:0000710;1.38e-09;20!CL:0000075;2.99e-07;27!CL:0002319;3.30e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-98,5;CL:0000540,5.07e-30,6;CL:0000031,5.07e-30,6;CL:0000404,5.07e-30,6;CL:0000047,1.01e-22,8;CL:0000148,1.53e-18,10;CL:0000541,1.53e-18,10;CL:0000147,1.90e-13,14;CL:0000039,2.24e-12,7;CL:0000586,2.24e-12,7;CL:0000133,1.32e-11,59;CL:0000710,1.32e-09,20;CL:0000221,1.50e-09,72;CL:0000075,2.90e-07,27;CL:0002319,3.44e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;4.15e-30;6!UBERON:0009117;5.80e-09;10!UBERON:0005564;5.80e-09;10!CL:0000133;3.28e-07;59 | |ontology_enrichment_development_v019=CL:0000031;4.15e-30;6!UBERON:0009117;5.80e-09;10!UBERON:0005564;5.80e-09;10!CL:0000133;3.28e-07;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005933!6.06e-13!1;UBERON:0005942!6.06e-13!1;UBERON:0005932!6.06e-13!1;UBERON:0001874!1.09e-12!1;UBERON:0000473!6.61e-07!8 | |ontology_enrichment_uberon=UBERON:0005933!6.06e-13!1;UBERON:0005942!6.06e-13!1;UBERON:0005932!6.06e-13!1;UBERON:0001874!1.09e-12!1;UBERON:0000473!6.61e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.22e-12;49!UBERON:0000473;5.69e-11;8!UBERON:0003135;3.14e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0000922;6.22e-12;49!UBERON:0000473;5.69e-11;8!UBERON:0003135;3.14e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.98e-11,8;UBERON:0003135,3.25e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,2.38553582978673,1.97529702878181,1.24393266018445,2.52320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,1.2378549293751,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,4.4875085086472,0,1.47031839255752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,2.38553582978673,1.97529702878181,1.24393266018445,2.52320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,1.2378549293751,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,4.4875085086472,0,1.47031839255752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:85499033..85499065,+ | |short_description=p@chr9:85499033..85499065,+ | ||
}} | }} |
Latest revision as of 02:56, 1 August 2015
Short description: | p@chr9:85499033..85499065, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:85499033..85499065, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-98 | 5 |
neuron | 5.07e-30 | 6 |
neuroblast | 5.07e-30 | 6 |
electrically signaling cell | 5.07e-30 | 6 |
neuronal stem cell | 1.01e-22 | 8 |
melanocyte | 1.53e-18 | 10 |
melanoblast | 1.53e-18 | 10 |
pigment cell | 1.90e-13 | 14 |
germ line cell | 2.24e-12 | 7 |
germ cell | 2.24e-12 | 7 |
neurectodermal cell | 1.32e-11 | 59 |
neurecto-epithelial cell | 1.32e-09 | 20 |
ectodermal cell | 1.50e-09 | 72 |
columnar/cuboidal epithelial cell | 2.90e-07 | 27 |
neural cell | 3.44e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 5.98e-11 | 8 |
male reproductive organ | 3.25e-08 | 11 |