FFCP PHASE1:Hg19::chrX:43587410..43587413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:43587410..43587413,+ | |||
|description=CAGE_peak_at_chrX:43587410..43587413,+ | |description=CAGE_peak_at_chrX:43587410..43587413,+ | ||
|id=chrX:43587410..43587413,+ | |id=chrX:43587410..43587413,+ | ||
|ontology_enrichment_celltype=CL:0002615!3.35e-07!3 | |ontology_enrichment_celltype=CL:0002615!3.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;6.30e-26;4!CL:0002222;6.30e-26;4!CL:0002224;6.30e-26;4 | |ontology_enrichment_celltype_v019=CL:0000306;6.30e-26;4!CL:0002222;6.30e-26;4!CL:0002224;6.30e-26;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,5.56e-26,4;CL:0002222,5.56e-26,4;CL:0002224,5.56e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.66e-21;5 | |ontology_enrichment_development_v019=UBERON:0007123;4.66e-21;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.62e-15!5;UBERON:0004117!1.62e-15!5;UBERON:0007689!1.62e-15!5;UBERON:0007123!1.62e-15!5;UBERON:0003091!1.62e-15!5;UBERON:0008814!1.52e-11!15;UBERON:0000341!1.72e-10!2;UBERON:0009722!1.46e-07!11;UBERON:0007690!1.46e-07!11;UBERON:0001723!2.32e-07!3;UBERON:0001033!2.32e-07!3;UBERON:0010056!2.32e-07!3 | |ontology_enrichment_uberon=UBERON:0002046!1.62e-15!5;UBERON:0004117!1.62e-15!5;UBERON:0007689!1.62e-15!5;UBERON:0007123!1.62e-15!5;UBERON:0003091!1.62e-15!5;UBERON:0008814!1.52e-11!15;UBERON:0000341!1.72e-10!2;UBERON:0009722!1.46e-07!11;UBERON:0007690!1.46e-07!11;UBERON:0001723!2.32e-07!3;UBERON:0001033!2.32e-07!3;UBERON:0010056!2.32e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;6.30e-26;4!UBERON:0005389;6.30e-26;4!UBERON:0000484;6.30e-26;4!UBERON:0000965;6.30e-26;4!UBERON:0001803;6.30e-26;4!UBERON:0002046;4.66e-21;5!UBERON:0007625;2.27e-10;11!UBERON:0001801;1.93e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0010077;6.30e-26;4!UBERON:0005389;6.30e-26;4!UBERON:0000484;6.30e-26;4!UBERON:0000965;6.30e-26;4!UBERON:0001803;6.30e-26;4!UBERON:0002046;4.66e-21;5!UBERON:0007625;2.27e-10;11!UBERON:0001801;1.93e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,5.56e-26,4;UBERON:0005389,5.56e-26,4;UBERON:0000484,5.56e-26,4;UBERON:0002546,5.56e-26,4;UBERON:0000965,5.56e-26,4;UBERON:0001803,5.56e-26,4;UBERON:0003073,5.56e-26,4;UBERON:0005426,5.56e-26,4;UBERON:0002046,5.15e-21,5;UBERON:0004117,5.15e-21,5;UBERON:0007689,5.15e-21,5;UBERON:0007123,5.15e-21,5;UBERON:0003091,5.15e-21,5;UBERON:0000076,9.39e-14,8;UBERON:0007625,2.16e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0001801,1.86e-08,14;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chrX:43587410..43587413,+ | |short_description=p@chrX:43587410..43587413,+ | ||
}} | }} |
Latest revision as of 08:08, 1 August 2015
Short description: | p@chrX:43587410..43587413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:43587410..43587413, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 5.56e-26 | 4 |
vertebrate lens cell | 5.56e-26 | 4 |
lens epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 5.56e-26 | 4 |
transparent eye structure | 5.56e-26 | 4 |
simple cuboidal epithelium | 5.56e-26 | 4 |
cranial placode | 5.56e-26 | 4 |
lens of camera-type eye | 5.56e-26 | 4 |
epithelium of lens | 5.56e-26 | 4 |
lens placode | 5.56e-26 | 4 |
lens vesicle | 5.56e-26 | 4 |
thyroid gland | 5.15e-21 | 5 |
pharyngeal pouch | 5.15e-21 | 5 |
thyroid diverticulum | 5.15e-21 | 5 |
pharyngeal pouch 2 | 5.15e-21 | 5 |
thyroid primordium | 5.15e-21 | 5 |
external ectoderm | 9.39e-14 | 8 |
pigment epithelium of eye | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
anterior segment of eyeball | 1.86e-08 | 14 |
pharyngeal arch system | 7.60e-07 | 18 |