FFCP PHASE1:Mm9::chr5:137634812..137634829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=149 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137634812..137634829,- | |||
|description=CAGE_peak_at_chr5:137634812..137634829,- | |description=CAGE_peak_at_chr5:137634812..137634829,- | ||
|id=chr5:137634812..137634829,- | |id=chr5:137634812..137634829,- | ||
|ontology_enrichment_celltype=CL:0002563!3.44e-15!9;CL:0002251!3.44e-15!9;CL:0000239!8.63e-14!6;CL:0000677!8.63e-14!6;CL:0000212!8.63e-14!6;CL:0000584!8.63e-14!6;CL:0000075!1.01e-11!7;CL:0000066!4.67e-09!25;CL:0002076!1.40e-08!15;CL:0000473!9.08e-08!3;CL:0000627!9.08e-08!3;CL:0000682!9.08e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.65e-13,6;CL:0000677,2.65e-13,6;CL:0000584,2.65e-13,6;CL:0000075,2.25e-11,7;CL:0000682,3.38e-10,3;CL:0002563,8.48e-09,9;CL:0002251,8.48e-09,9;CL:0000066,4.13e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.92e-35!43;UBERON:0000344!8.42e-28!15;UBERON:0005409!2.80e-26!59;UBERON:0001242!8.51e-24!13;UBERON:0000060!8.51e-24!13;UBERON:0001262!8.51e-24!13;UBERON:0004786!8.51e-24!13;UBERON:0004923!1.34e-18!24;UBERON:0003350!3.44e-15!9;UBERON:0004808!3.44e-15!9;UBERON:0001277!3.44e-15!9;UBERON:0000485!3.48e-12!11;UBERON:0004119!3.68e-11!130;UBERON:0000925!3.68e-11!130;UBERON:0006595!3.68e-11!130;UBERON:0001007!1.77e-10!128;UBERON:0001555!1.77e-10!128;UBERON:0007026!1.77e-10!128;UBERON:0004921!7.39e-09!126;UBERON:0004185!7.39e-09!126;UBERON:0000331!5.91e-08!3;UBERON:0002116!5.91e-08!3;UBERON:0001204!5.91e-08!3;UBERON:0001168!5.91e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.53e-40,31;UBERON:0005409,3.37e-28,47;UBERON:0000344,3.94e-24,15;UBERON:0001242,5.25e-19,13;UBERON:0001262,5.25e-19,13;UBERON:0004786,5.25e-19,13;UBERON:0004923,2.39e-14,24;UBERON:0002108,8.48e-14,4;UBERON:0001007,2.99e-11,116;UBERON:0001555,2.99e-11,116;UBERON:0007026,2.99e-11,116;UBERON:0004119,5.51e-11,118;UBERON:0000925,5.51e-11,118;UBERON:0006595,5.51e-11,118;UBERON:0000331,1.86e-10,3;UBERON:0002116,1.86e-10,3;UBERON:0001204,1.86e-10,3;UBERON:0001168,1.86e-10,3;UBERON:0004921,3.20e-09,114;UBERON:0003350,8.48e-09,9;UBERON:0004808,8.48e-09,9;UBERON:0001277,8.48e-09,9;UBERON:0001155,5.29e-08,2;UBERON:0000059,5.29e-08,2;UBERON:0000485,3.73e-07,11;UBERON:0001962,4.76e-07,2;UBERON:0001961,4.76e-07,2;UBERON:0001744,4.76e-07,2 | |||
|phase1_expression=0,3.48975407639361,5.91499011206397,2.41971369045464,5.50985302940982,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,1.83527424853736,2.8711598205751,2.58457197695445,3.44753972297422,6.84084310042946,2.77233142735924,3.10422714917427,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,14.9113408974498,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,8.26046957459495,16.3959351331397,0,0,0,0.201683524623343,0,0.380451252225118,27.0481565080372,6.0938613247884,2.01068167040216,2.38747766449381,0.779856348476481,44.0421510240569,39.1209870273197,27.8797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,27.9821603164657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8475722012035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,5.91499011206397,2.41971369045464,5.50985302940982,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.71987118748791,1.83527424853736,2.8711598205751,2.58457197695445,3.44753972297422,6.84084310042946,2.77233142735924,3.10422714917427,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,14.9113408974498,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,8.26046957459495,16.3959351331397,0,0,0,0.201683524623343,0,0.380451252225118,27.0481565080372,6.0938613247884,2.01068167040216,2.38747766449381,0.779856348476481,44.0421510240569,39.1209870273197,27.8797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,27.9821603164657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.8475722012035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:137634812..137634829,- | |short_description=p@chr5:137634812..137634829,- | ||
}} | }} |
Latest revision as of 21:16, 3 August 2015
Short description: | p@chr5:137634812..137634829, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137634812..137634829, - |
Coexpression cluster: | MCL_coexpression_mm9:149 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.65e-13 | 6 |
gut absorptive cell | 2.65e-13 | 6 |
enterocyte | 2.65e-13 | 6 |
columnar/cuboidal epithelial cell | 2.25e-11 | 7 |
M cell of gut | 3.38e-10 | 3 |
intestinal epithelial cell | 8.48e-09 | 9 |
epithelial cell of alimentary canal | 8.48e-09 | 9 |
epithelial cell | 4.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.53e-40 | 31 |
gastrointestinal system | 3.37e-28 | 47 |
mucosa | 3.94e-24 | 15 |
intestinal mucosa | 5.25e-19 | 13 |
wall of intestine | 5.25e-19 | 13 |
gastrointestinal system mucosa | 5.25e-19 | 13 |
organ component layer | 2.39e-14 | 24 |
small intestine | 8.48e-14 | 4 |
digestive system | 2.99e-11 | 116 |
digestive tract | 2.99e-11 | 116 |
primitive gut | 2.99e-11 | 116 |
endoderm-derived structure | 5.51e-11 | 118 |
endoderm | 5.51e-11 | 118 |
presumptive endoderm | 5.51e-11 | 118 |
ileal mucosa | 1.86e-10 | 3 |
ileum | 1.86e-10 | 3 |
mucosa of small intestine | 1.86e-10 | 3 |
wall of small intestine | 1.86e-10 | 3 |
subdivision of digestive tract | 3.20e-09 | 114 |
epithelium of mucosa | 8.48e-09 | 9 |
gastrointestinal system epithelium | 8.48e-09 | 9 |
intestinal epithelium | 8.48e-09 | 9 |
colon | 5.29e-08 | 2 |
large intestine | 5.29e-08 | 2 |
simple columnar epithelium | 3.73e-07 | 11 |
gut-associated lymphoid tissue | 4.76e-07 | 2 |
mucosa-associated lymphoid tissue | 4.76e-07 | 2 |
lymphoid tissue | 4.76e-07 | 2 |