FFCP PHASE1:Mm9::chr16:5007627..5007643,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:5007627..5007643,+ | |||
|description=CAGE_peak_at_chr16:5007627..5007643,+ | |description=CAGE_peak_at_chr16:5007627..5007643,+ | ||
|id=chr16:5007627..5007643,+ | |id=chr16:5007627..5007643,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.39e-11!9;CL:0002251!5.39e-11!9;CL:0000239!1.44e-10!6;CL:0000677!1.44e-10!6;CL:0000212!1.44e-10!6;CL:0000584!1.44e-10!6;CL:0000075!6.85e-09!7;CL:0000066!2.29e-08!25 | |ontology_enrichment_celltype=CL:0002563!5.39e-11!9;CL:0002251!5.39e-11!9;CL:0000239!1.44e-10!6;CL:0000677!1.44e-10!6;CL:0000212!1.44e-10!6;CL:0000584!1.44e-10!6;CL:0000075!6.85e-09!7;CL:0000066!2.29e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-23,6;CL:0000677,1.16e-23,6;CL:0000584,1.16e-23,6;CL:0000075,3.23e-20,7;CL:0002563,1.29e-15,9;CL:0002251,1.29e-15,9;CL:0000682,1.35e-12,3;CL:0000066,1.25e-11,25;CL:0002076,3.72e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.95e-21!43;UBERON:0000344!1.04e-19!15;UBERON:0005409!6.49e-19!59;UBERON:0001242!5.80e-17!13;UBERON:0000060!5.80e-17!13;UBERON:0001262!5.80e-17!13;UBERON:0004786!5.80e-17!13;UBERON:0001007!4.00e-12!128;UBERON:0001555!4.00e-12!128;UBERON:0007026!4.00e-12!128;UBERON:0004119!9.27e-12!130;UBERON:0000925!9.27e-12!130;UBERON:0006595!9.27e-12!130;UBERON:0003350!5.39e-11!9;UBERON:0004808!5.39e-11!9;UBERON:0001277!5.39e-11!9;UBERON:0004923!9.25e-11!24;UBERON:0004921!1.13e-10!126;UBERON:0004185!1.13e-10!126;UBERON:0000485!1.17e-08!11 | |ontology_enrichment_uberon=UBERON:0000160!9.95e-21!43;UBERON:0000344!1.04e-19!15;UBERON:0005409!6.49e-19!59;UBERON:0001242!5.80e-17!13;UBERON:0000060!5.80e-17!13;UBERON:0001262!5.80e-17!13;UBERON:0004786!5.80e-17!13;UBERON:0001007!4.00e-12!128;UBERON:0001555!4.00e-12!128;UBERON:0007026!4.00e-12!128;UBERON:0004119!9.27e-12!130;UBERON:0000925!9.27e-12!130;UBERON:0006595!9.27e-12!130;UBERON:0003350!5.39e-11!9;UBERON:0004808!5.39e-11!9;UBERON:0001277!5.39e-11!9;UBERON:0004923!9.25e-11!24;UBERON:0004921!1.13e-10!126;UBERON:0004185!1.13e-10!126;UBERON:0000485!1.17e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.56e-36,15;UBERON:0000160,5.56e-34,31;UBERON:0001242,2.65e-29,13;UBERON:0001262,2.65e-29,13;UBERON:0004786,2.65e-29,13;UBERON:0004923,1.23e-21,24;UBERON:0005409,2.09e-21,47;UBERON:0002108,5.75e-16,4;UBERON:0003350,1.29e-15,9;UBERON:0004808,1.29e-15,9;UBERON:0001277,1.29e-15,9;UBERON:0000485,1.10e-12,11;UBERON:0000331,1.24e-12,3;UBERON:0002116,1.24e-12,3;UBERON:0001204,1.24e-12,3;UBERON:0001168,1.24e-12,3;UBERON:0001007,5.81e-09,116;UBERON:0001555,5.81e-09,116;UBERON:0007026,5.81e-09,116;UBERON:0004119,9.42e-09,118;UBERON:0000925,9.42e-09,118;UBERON:0006595,9.42e-09,118;UBERON:0001962,3.22e-08,2;UBERON:0001961,3.22e-08,2;UBERON:0001744,3.22e-08,2;UBERON:0004921,5.21e-07,114 | |||
|phase1_expression=0,5.58360652222978,11.3749809847384,14.8207463540347,16.5295590882295,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,13.2073351746455,4.73838195774982,3.23206849028834,10.0712412311878,15.3738379153558,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.889512175379481,0.190225626112559,3.79623249235609,0.988193728344065,0.251335208800269,0.198956472041151,0.19496408711912,3.59527763461689,5.40345124686736,6.57166201739412,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.616985819609003,0.296452627087149,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,11.3749809847384,14.8207463540347,16.5295590882295,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,13.2073351746455,4.73838195774982,3.23206849028834,10.0712412311878,15.3738379153558,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,2.90895623329899,0,0,0.128867461322093,0.403367049246685,0.889512175379481,0.190225626112559,3.79623249235609,0.988193728344065,0.251335208800269,0.198956472041151,0.19496408711912,3.59527763461689,5.40345124686736,6.57166201739412,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.616985819609003,0.296452627087149,0.333690211432188,0,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr16:5007627..5007643,+ | |short_description=p@chr16:5007627..5007643,+ | ||
}} | }} |
Latest revision as of 22:23, 3 August 2015
Short description: | p@chr16:5007627..5007643, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:5007627..5007643, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.16e-23 | 6 |
gut absorptive cell | 1.16e-23 | 6 |
enterocyte | 1.16e-23 | 6 |
columnar/cuboidal epithelial cell | 3.23e-20 | 7 |
intestinal epithelial cell | 1.29e-15 | 9 |
epithelial cell of alimentary canal | 1.29e-15 | 9 |
M cell of gut | 1.35e-12 | 3 |
epithelial cell | 1.25e-11 | 25 |
endo-epithelial cell | 3.72e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.56e-36 | 15 |
intestine | 5.56e-34 | 31 |
intestinal mucosa | 2.65e-29 | 13 |
wall of intestine | 2.65e-29 | 13 |
gastrointestinal system mucosa | 2.65e-29 | 13 |
organ component layer | 1.23e-21 | 24 |
gastrointestinal system | 2.09e-21 | 47 |
small intestine | 5.75e-16 | 4 |
epithelium of mucosa | 1.29e-15 | 9 |
gastrointestinal system epithelium | 1.29e-15 | 9 |
intestinal epithelium | 1.29e-15 | 9 |
simple columnar epithelium | 1.10e-12 | 11 |
ileal mucosa | 1.24e-12 | 3 |
ileum | 1.24e-12 | 3 |
mucosa of small intestine | 1.24e-12 | 3 |
wall of small intestine | 1.24e-12 | 3 |
digestive system | 5.81e-09 | 116 |
digestive tract | 5.81e-09 | 116 |
primitive gut | 5.81e-09 | 116 |
endoderm-derived structure | 9.42e-09 | 118 |
endoderm | 9.42e-09 | 118 |
presumptive endoderm | 9.42e-09 | 118 |
gut-associated lymphoid tissue | 3.22e-08 | 2 |
mucosa-associated lymphoid tissue | 3.22e-08 | 2 |
lymphoid tissue | 3.22e-08 | 2 |
subdivision of digestive tract | 5.21e-07 | 114 |