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FFCP PHASE1:Mm9::chr16:5204074..5204110,-: Difference between revisions

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{{FFCP|EntrezGene=27426|HGNC=|MCL_coexpression_id=38|UniProt=Q8BJ48,D3Z6C9|association_with_transcript=0bp_to_ENSMUST00000023911,ENSMUST00000147567,NM_013796,NR_027804,uc007ybv.2,uc007ybw.2_5end|description=CAGE_peak_1_at_Nagpa_5end|id=chr16:5204074..5204110,-|ontology_enrichment_celltype=CL:0000219!4.50e-14!54;CL:0002320!1.33e-11!46;CL:0000134!1.33e-11!46;CL:0000063!3.79e-08!66;CL:0000988!6.89e-07!32;CL:0002032!6.89e-07!32;CL:0000037!6.89e-07!32;CL:0000566!6.89e-07!32;CL:0000837!6.89e-07!32|ontology_enrichment_celltype_v019_2=CL:0000219,4.46e-14,54;CL:0002320,1.32e-11,46;CL:0000134,1.32e-11,46;CL:0000988,6.83e-07,32;CL:0002032,6.83e-07,32;CL:0000037,6.83e-07,32;CL:0000837,6.83e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.33e-11!46;UBERON:0002405!4.46e-10!70;UBERON:0007023!8.40e-10!51;UBERON:0002371!3.49e-08!16;UBERON:0000926!4.46e-08!193;UBERON:0004120!4.46e-08!193;UBERON:0006603!4.46e-08!193;UBERON:0005256!1.02e-07!47;UBERON:0002193!1.23e-07!48;UBERON:0002204!1.50e-07!32;UBERON:0004119!2.83e-07!130;UBERON:0000925!2.83e-07!130;UBERON:0006595!2.83e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-11,46;UBERON:0007023,8.40e-10,51;UBERON:0005256,6.01e-09,45;UBERON:0004119,2.00e-08,118;UBERON:0000925,2.00e-08,118;UBERON:0006595,2.00e-08,118;UBERON:0002371,3.49e-08,16;UBERON:0001007,8.11e-08,116;UBERON:0001555,8.11e-08,116;UBERON:0007026,8.11e-08,116;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0002204,1.50e-07,32;UBERON:0004921,2.44e-07,114;UBERON:0000926,3.64e-07,120;UBERON:0004120,3.64e-07,120;UBERON:0006603,3.64e-07,120|phase1_expression=3.36312578920067,5.58360652222978,7.27998783023258,9.0739263392049,12.0214975187123,7.05092942029937,8.41005506143892,14.4618122254565,12.3894075493467,11.4691617897777,10.4442960617558,12.9230897572445,14.3808613142213,17.5715008862185,11.6588416635482,5.66930748691513,7.69518065940961,14.5112596064789,13.0258711925452,16.1268067683251,8.07911256435163,10.7234227296956,6.26879493933445,11.3594620183319,12.15869189656,8.6134794617253,4.73838195774982,7.97243560937789,13.4916627814025,12.3494763582366,10.199603490144,9.52546010189447,11.0711661765223,0,8.37669697278696,7.64679368649065,8.77928231928187,7.95210098400125,14.0640362014284,13.088093599345,7.64700934440319,6.14740936462601,8.25367600152961,9.56815816614387,9.83356232829291,8.81024410376071,32.8604364626176,8.93903141159831,11.8630538676615,11.4713640453827,13.5786828976602,15.8127820801469,5.5368259999053,10.1550699881588,7.05796978199174,9.77585856936598,16.3324060765091,10.8291139378263,3.84401275633236,6.87688273053643,5.70448263155561,9.4876468979357,20.4537803105562,97.1891694663911,83.0647744556259,100.1776962074,35.6524131516902,28.8163728991166,3.11068836925433,2.56511282830212,3.57552434297349,5.71301968807607,5.07997644188711,3.42974237801871,2.87536413054709,0.919218786610021,2.20231761998777,5.36286819957788,3.37934373163736,3.69281605644543,3.38504281328916,3.12548022334056,7.81712397203867,4.50210088025344,4.88954392885792,6.77645746589436,4.55589378557129,5.40558392893372,9.23859558664845,9.29530189313462,11.0148505706638,21.5105969245347,6.79971333707751,9.17495425784289,12.9955283489534,10.7526452903361,11.0951091904084,12.6118438707763,13.768658243952,12.3668851078619,4.64783285263046,14.115912515575,12.7402619853323,0,2.81438353314578,3.80039798212648,7.07734223020697,12.2176751299394,15.018397251536,14.398887489288,10.0621489524359,15.2232739156071,14.0675453326196,11.1534754008941,9.8774513993992,18.2216557428029,10.8765785803125,14.0261376212314,13.2691582792481,7.60304194752823,8.39197770149496,5.81850303762267,7.45567044872489,7.90508151931177,8.58731497935166,12.2619386500124,8.74650408893218,10.1983464268879,12.3258120260873,8.38827580667007,8.23501085073528,2.89005009859588,5.73620256634512,5.11430914660661,6.85700547046548,4.38051410282946,6.61955865027056,10.698999472468,10.3616330957807,12.2056276414155,3.6433724029557,2.98872735763515,4.32149111532838,2.10986744970001,3.81004395247436,3.20284300712124,4.31027932974753,5.17406741478031,4.95806383745537,3.78212160335639,4.92663147659057,5.69908904311695,4.17070873838397,6.268538997399,7.20237477427802,5.37392520409932,14.7464769335779,14.1541348913093,16.1973194655488,3.93538967817454,6.3322036194896,5.22179978236943,3.78791576936336,3.73852040320067,3.70241070929708,3.95307706075693,3.75582761959467,4.55384835231961,5.59503489705834,5.91002870684743,7.70153690685629,8.62579925809461,10.3188554186794,11.8101648509127,6.30869845692382,3.80747065803352,8.26046957459495,9.52022039988759,3.19932375802851,3.0190767341857,7.34544529535932,13.7144796743873,15.1217069814512,17.8812088545806,7.11793592316767,12.8465184684728,14.8287773192159,12.7332142106337,12.8676297498619,10.7858329038507,9.72621224436124,12.9441827615339,4.93136542478012,5.36968009265725,4.50830942692322,5.49858585182348,4.26695471768777,6.17195215034803,6.32365371242573,8.4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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27426
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=uniprot:Q8BJ48,uniprot:D3Z6C9
|association_with_transcript=0bp_to_ENSMUST00000023911,ENSMUST00000147567,NM_013796,NR_027804,uc007ybv.2,uc007ybw.2_5end
|cluster_id=chr16:5204074..5204110,-
|description=CAGE_peak_1_at_Nagpa_5end
|id=chr16:5204074..5204110,-
|ontology_enrichment_celltype=CL:0000219!4.50e-14!54;CL:0002320!1.33e-11!46;CL:0000134!1.33e-11!46;CL:0000063!3.79e-08!66;CL:0000988!6.89e-07!32;CL:0002032!6.89e-07!32;CL:0000037!6.89e-07!32;CL:0000566!6.89e-07!32;CL:0000837!6.89e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000219,4.46e-14,54;CL:0002320,1.32e-11,46;CL:0000134,1.32e-11,46;CL:0000988,6.83e-07,32;CL:0002032,6.83e-07,32;CL:0000037,6.83e-07,32;CL:0000837,6.83e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!1.33e-11!46;UBERON:0002405!4.46e-10!70;UBERON:0007023!8.40e-10!51;UBERON:0002371!3.49e-08!16;UBERON:0000926!4.46e-08!193;UBERON:0004120!4.46e-08!193;UBERON:0006603!4.46e-08!193;UBERON:0005256!1.02e-07!47;UBERON:0002193!1.23e-07!48;UBERON:0002204!1.50e-07!32;UBERON:0004119!2.83e-07!130;UBERON:0000925!2.83e-07!130;UBERON:0006595!2.83e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-11,46;UBERON:0007023,8.40e-10,51;UBERON:0005256,6.01e-09,45;UBERON:0004119,2.00e-08,118;UBERON:0000925,2.00e-08,118;UBERON:0006595,2.00e-08,118;UBERON:0002371,3.49e-08,16;UBERON:0001007,8.11e-08,116;UBERON:0001555,8.11e-08,116;UBERON:0007026,8.11e-08,116;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0002204,1.50e-07,32;UBERON:0004921,2.44e-07,114;UBERON:0000926,3.64e-07,120;UBERON:0004120,3.64e-07,120;UBERON:0006603,3.64e-07,120
|phase1_expression=3.36312578920067,5.58360652222978,7.27998783023258,9.0739263392049,12.0214975187123,7.05092942029937,8.41005506143892,14.4618122254565,12.3894075493467,11.4691617897777,10.4442960617558,12.9230897572445,14.3808613142213,17.5715008862185,11.6588416635482,5.66930748691513,7.69518065940961,14.5112596064789,13.0258711925452,16.1268067683251,8.07911256435163,10.7234227296956,6.26879493933445,11.3594620183319,12.15869189656,8.6134794617253,4.73838195774982,7.97243560937789,13.4916627814025,12.3494763582366,10.199603490144,9.52546010189447,11.0711661765223,0,8.37669697278696,7.64679368649065,8.77928231928187,7.95210098400125,14.0640362014284,13.088093599345,7.64700934440319,6.14740936462601,8.25367600152961,9.56815816614387,9.83356232829291,8.81024410376071,32.8604364626176,8.93903141159831,11.8630538676615,11.4713640453827,13.5786828976602,15.8127820801469,5.5368259999053,10.1550699881588,7.05796978199174,9.77585856936598,16.3324060765091,10.8291139378263,3.84401275633236,6.87688273053643,5.70448263155561,9.4876468979357,20.4537803105562,97.1891694663911,83.0647744556259,100.1776962074,35.6524131516902,28.8163728991166,3.11068836925433,2.56511282830212,3.57552434297349,5.71301968807607,5.07997644188711,3.42974237801871,2.87536413054709,0.919218786610021,2.20231761998777,5.36286819957788,3.37934373163736,3.69281605644543,3.38504281328916,3.12548022334056,7.81712397203867,4.50210088025344,4.88954392885792,6.77645746589436,4.55589378557129,5.40558392893372,9.23859558664845,9.29530189313462,11.0148505706638,21.5105969245347,6.79971333707751,9.17495425784289,12.9955283489534,10.7526452903361,11.0951091904084,12.6118438707763,13.768658243952,12.3668851078619,4.64783285263046,14.115912515575,12.7402619853323,0,2.81438353314578,3.80039798212648,7.07734223020697,12.2176751299394,15.018397251536,14.398887489288,10.0621489524359,15.2232739156071,14.0675453326196,11.1534754008941,9.8774513993992,18.2216557428029,10.8765785803125,14.0261376212314,13.2691582792481,7.60304194752823,8.39197770149496,5.81850303762267,7.45567044872489,7.90508151931177,8.58731497935166,12.2619386500124,8.74650408893218,10.1983464268879,12.3258120260873,8.38827580667007,8.23501085073528,2.89005009859588,5.73620256634512,5.11430914660661,6.85700547046548,4.38051410282946,6.61955865027056,10.698999472468,10.3616330957807,12.2056276414155,3.6433724029557,2.98872735763515,4.32149111532838,2.10986744970001,3.81004395247436,3.20284300712124,4.31027932974753,5.17406741478031,4.95806383745537,3.78212160335639,4.92663147659057,5.69908904311695,4.17070873838397,6.268538997399,7.20237477427802,5.37392520409932,14.7464769335779,14.1541348913093,16.1973194655488,3.93538967817454,6.3322036194896,5.22179978236943,3.78791576936336,3.73852040320067,3.70241070929708,3.95307706075693,3.75582761959467,4.55384835231961,5.59503489705834,5.91002870684743,7.70153690685629,8.62579925809461,10.3188554186794,11.8101648509127,6.30869845692382,3.80747065803352,8.26046957459495,9.52022039988759,3.19932375802851,3.0190767341857,7.34544529535932,13.7144796743873,15.1217069814512,17.8812088545806,7.11793592316767,12.8465184684728,14.8287773192159,12.7332142106337,12.8676297498619,10.7858329038507,9.72621224436124,12.9441827615339,4.93136542478012,5.36968009265725,4.50830942692322,5.49858585182348,4.26695471768777,6.17195215034803,6.32365371242573,8.41377843483732,8.16393384775149,8.76119863844784,18.6765155064904,6.67380422864376,11.2038627214526,8.99448449539415,8.92584534109413,7.71766911207734,7.38414970166117,7.48009957372108,5.0261920300261,9.88421087477093,5.75072826109418,8.93138274404408,8.42501717409313,13.1341016532498,9.68746033018326,15.9206362049911,17.3667998756608,4.9267767060326,4.72598431681875,3.90413697282933,6.10194645550105,6.365237782789,6.9032655856944,9.56154874503214,4.72905432318573,7.75126413770712,9.24837658213425,11.9620219742489,14.1601685130034,14.7542039753142,54.284862218138,56.5661911171458,10.3270497333998,13.5209005689319,8.66973185934077,6.21221938938677,4.75411341592359,6.81671503451807,3.78609863299508,5.0757036758563,3.87762115919038,3.10659437338318,6.46116154838943,4.24614796183249,3.23848561339915,6.13737301613755,3.95287777946523,8.35435422696698,13.3423680095772,6.94455854302295,5.86393053672874,16.332042174281,14.6019652173959,5.09839335925461,6.04647113929502,4.14931175462976,8.85905678642318,4.30409207121498,8.5281336745513,5.08947221268508,6.06045543254026,5.05658812697306,7.37930260024991,7.21948802737308,6.12791290356818,4.14140516272013,5.43306471887569,3.00071849044229,5.32020700926821,4.10248280484762,4.77192159746151,7.91608867697958,16.8963629805871,11.0152676849186,12.5701186891328,7.25499512942512,6.62004149453213,6.81536051688161,8.71418111222896,8.86360858623331,11.0762717919343,10.0129663085675,14.6948957486153,9.49379592630823,7.03739204004904,6.02779062415011,7.38148829693536,6.86334519619568,2.37969801991397,4.61839792668071,3.17859939750175,9.54670618015114,4.9032079005076,8.53941761932765,4.42821897369385,5.64538399239065,5.8957892211468,7.41753905116514,8.18269211680826,10.9937495633292,10.2395828900516,11.8054469486516,3.94585057078933,7.32631075615496,6.12196414691261,6.22243802700952,7.36210993823067,6.08242051766801,5.8678619322877,7.68205870579306,9.85677837601682,5.79801889982414,6.62469014393091,9.48033361884535,7.50083296573608,5.95723551555998,7.7952493786677,7.34009452236674,4.96703386953162,7.21172697119813,6.64602872285597,7.16861794631848,6.24895814570999,5.84791873793675,7.30934105548143,8.37043022270866,7.59699864180198,12.2434407152214,4.88369097422942,8.88167180433809,6.04384618910682,17.3870634628971,17.0791052660576,16.1173429355193,12.862102744744,11.5361583928134,3.95326289831947,4.14292712856459,2.86447756719698,4.1244763762485,3.42541259885321,5.2877572817279,4.72515750162264,8.10578165803597,6.34399372577886,4.65984280576638,0.830298780673413,6.3843979744165,5.12200817262403,6.80698807791223,3.14419743941973,1.83843508450014,5.33392146723877,6.18105171716683,4.49286893428541,5.81203587056734,5.0695859978048,3.9611531691076,4.68207537349412,5.18603734479441,4.65227298540468,5.71552429539688,5.79421629724277,4.82273051159263,4.12085900803307,4.56316652416632,4.11443102862498,3.37204031702741,4.29185141905178,3.63366041580821,4.79957840118186,3.89227196301712,6.95126296916536,3.94604567156764,5.16055632614275,7.2948495315506,6.99946606932627,5.51625101303155,7.7753898202241,5.11291575913688,5.20847849649082,9.74261253957989,10.7608539884888,10.09893954027,6.12122662620299,8.38247392654159,8.57910991795559
|short_description=p1@Nagpa
}}

Revision as of 22:45, 3 August 2015

Short description:p1@Nagpa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nagpa_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 0bp_to_ENSMUST00000023911, ENSMUST00000147567, NM_013796, NR_027804, uc007ybv.2, uc007ybw.2_5end
EntrezGene:27426
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nagpa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.38
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B913.49
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.83
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C797.19
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E783.06
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2100.18
Mouse Microglia, donor1.CNhs12629.11718-123C835.65
Mouse Microglia, donor2.CNhs12634.11736-123E828.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D99.24
Mouse Schwann, donor2.CNhs12573.11746-123F99.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D714.40
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I114.07
adrenal gland, embryo E18.CNhs11026.1262-18F511.15
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I318.22
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H114.03
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.33
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.70
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.20
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G17.70
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D211.81
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H413.71
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F717.88
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E39.73
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G76.17
kidney, neonate N10.CNhs11206.758-6D56.32
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F38.16
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B218.68
liver, embryo E12.CNhs10601.355-15F86.67
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A313.13
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C714.16
lung, neonate N30.CNhs11133.1394-42H214.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A154.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A156.57
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H213.52
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G616.33
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I716.90
placenta, adult pregnant day17.CNhs10464.577-18G311.02
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H36.82
skin, neonate N06.CNhs11097.693-20I58.71
skin, neonate N10.CNhs11108.762-6C48.86
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G214.69
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A98.18
stomach, neonate N25.CNhs11104.1355-25E410.99
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I25.96
thymus, embryo E16.CNhs11002.456-26C57.80
thymus, embryo E17.CNhs10581.478-18C17.34
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F87.21
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D36.25
thymus, neonate N10.CNhs11194.748-24E45.85
thymus, neonate N20.CNhs11186.820-7A27.31
thymus, neonate N25.CNhs11125.1362-25G78.37
thymus, neonate N30.CNhs11132.1393-42G27.60
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E417.39
uterus, adult pregnant day19.CNhs10497.590-15F517.08
uterus, adult.CNhs10509.92-27E516.12
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B48.58





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue1.32e-1146
adult organism8.40e-1051
trunk mesenchyme6.01e-0945
endoderm-derived structure2.00e-08118
endoderm2.00e-08118
presumptive endoderm2.00e-08118
bone marrow3.49e-0816
digestive system8.11e-08116
digestive tract8.11e-08116
primitive gut8.11e-08116
hemolymphoid system1.22e-0748
immune system1.22e-0748
musculoskeletal system1.50e-0732
subdivision of digestive tract2.44e-07114
mesoderm3.64e-07120
mesoderm-derived structure3.64e-07120
presumptive mesoderm3.64e-07120
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