FFCP PHASE1:Mm9::chr8:67653308..67653323,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=12|UniProt=Q3V2G4|association_with_transcript=-86bp_to_ENSMUST00000098713_5end|description=CAGE_peak_1_at_ENSMUST00000098713_5end|id=chr8:67653308..67653323,-|ontology_enrichment_celltype=CL:0002563!1.65e-09!9;CL:0002251!1.65e-09!9;CL:0000239!2.04e-07!6;CL:0000677!2.04e-07!6;CL:0000212!2.04e-07!6;CL:0000584!2.04e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,5.58e-13,6;CL:0000677,5.58e-13,6;CL:0000584,5.58e-13,6;CL:0000075,5.10e-11,7;CL:0002563,2.11e-08,9;CL:0002251,2.11e-08,9;CL:0000682,1.42e-07,3;CL:0000066,5.80e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.50e-25!59;UBERON:0000160!3.59e-22!43;UBERON:0000344!5.03e-16!15;UBERON:0001242!5.37e-14!13;UBERON:0000060!5.37e-14!13;UBERON:0001262!5.37e-14!13;UBERON:0004786!5.37e-14!13;UBERON:0001007!8.06e-14!128;UBERON:0001555!8.06e-14!128;UBERON:0007026!8.06e-14!128;UBERON:0004119!2.46e-13!130;UBERON:0000925!2.46e-13!130;UBERON:0006595!2.46e-13!130;UBERON:0004921!1.71e-12!126;UBERON:0004185!1.71e-12!126;UBERON:0003350!1.65e-09!9;UBERON:0004808!1.65e-09!9;UBERON:0001277!1.65e-09!9;UBERON:0004923!4.32e-08!24;UBERON:0000485!2.58e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.14e-45,47;UBERON:0000160,1.71e-40,31;UBERON:0000344,6.14e-20,15;UBERON:0001007,6.62e-20,116;UBERON:0001555,6.62e-20,116;UBERON:0007026,6.62e-20,116;UBERON:0004119,1.98e-19,118;UBERON:0000925,1.98e-19,118;UBERON:0006595,1.98e-19,118;UBERON:0004921,1.37e-17,114;UBERON:0001242,3.41e-16,13;UBERON:0001262,3.41e-16,13;UBERON:0004786,3.41e-16,13;UBERON:0004923,2.08e-11,24;UBERON:0002108,7.87e-10,4;UBERON:0003350,2.11e-08,9;UBERON:0004808,2.11e-08,9;UBERON:0001277,2.11e-08,9;UBERON:0000331,5.61e-08,3;UBERON:0002116,5.61e-08,3;UBERON:0001204,5.61e-08,3;UBERON:0001168,5.61e-08,3;UBERON:0000945,4.21e-07,16;UBERON:0010039,4.21e-07,16;UBERON:0011216,5.14e-07,194;UBERON:0000485,9.71e-07,11|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,3.50627010962443,5.70789524500425,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.07971206614945,2.52350209173887,5.16808767703518,6.03066794622705,4.30942465371778,9.31114755336232,4.28451220591882,7.98229838359097,0,0,0,0.866554859253824,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,1.08245520505607,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4947081960441,3.43785736662608,0,0.232236671860439,1.03093969057675,0.80673409849337,1.33426826306922,3.42406127002606,7.59246498471219,2.47048432086016,4.77536896720512,2.38747766449381,3.11942539390592,7.19055526923377,10.1584883441106,11.1519113022446,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,1.08005340821801,1.25452977608681,2.18362563746178,2.02296519577231,1.57041565878138,5.49687478166462,5.05498395837992,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.830445126869219,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p1@ENSMUST00000098713}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V2G4 | |||
|association_with_transcript=-86bp_to_ENSMUST00000098713_5end | |||
|cluster_id=chr8:67653308..67653323,- | |||
|description=CAGE_peak_1_at_ENSMUST00000098713_5end | |||
|id=chr8:67653308..67653323,- | |||
|ontology_enrichment_celltype=CL:0002563!1.65e-09!9;CL:0002251!1.65e-09!9;CL:0000239!2.04e-07!6;CL:0000677!2.04e-07!6;CL:0000212!2.04e-07!6;CL:0000584!2.04e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.58e-13,6;CL:0000677,5.58e-13,6;CL:0000584,5.58e-13,6;CL:0000075,5.10e-11,7;CL:0002563,2.11e-08,9;CL:0002251,2.11e-08,9;CL:0000682,1.42e-07,3;CL:0000066,5.80e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.50e-25!59;UBERON:0000160!3.59e-22!43;UBERON:0000344!5.03e-16!15;UBERON:0001242!5.37e-14!13;UBERON:0000060!5.37e-14!13;UBERON:0001262!5.37e-14!13;UBERON:0004786!5.37e-14!13;UBERON:0001007!8.06e-14!128;UBERON:0001555!8.06e-14!128;UBERON:0007026!8.06e-14!128;UBERON:0004119!2.46e-13!130;UBERON:0000925!2.46e-13!130;UBERON:0006595!2.46e-13!130;UBERON:0004921!1.71e-12!126;UBERON:0004185!1.71e-12!126;UBERON:0003350!1.65e-09!9;UBERON:0004808!1.65e-09!9;UBERON:0001277!1.65e-09!9;UBERON:0004923!4.32e-08!24;UBERON:0000485!2.58e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.14e-45,47;UBERON:0000160,1.71e-40,31;UBERON:0000344,6.14e-20,15;UBERON:0001007,6.62e-20,116;UBERON:0001555,6.62e-20,116;UBERON:0007026,6.62e-20,116;UBERON:0004119,1.98e-19,118;UBERON:0000925,1.98e-19,118;UBERON:0006595,1.98e-19,118;UBERON:0004921,1.37e-17,114;UBERON:0001242,3.41e-16,13;UBERON:0001262,3.41e-16,13;UBERON:0004786,3.41e-16,13;UBERON:0004923,2.08e-11,24;UBERON:0002108,7.87e-10,4;UBERON:0003350,2.11e-08,9;UBERON:0004808,2.11e-08,9;UBERON:0001277,2.11e-08,9;UBERON:0000331,5.61e-08,3;UBERON:0002116,5.61e-08,3;UBERON:0001204,5.61e-08,3;UBERON:0001168,5.61e-08,3;UBERON:0000945,4.21e-07,16;UBERON:0010039,4.21e-07,16;UBERON:0011216,5.14e-07,194;UBERON:0000485,9.71e-07,11 | |||
|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,3.50627010962443,5.70789524500425,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.07971206614945,2.52350209173887,5.16808767703518,6.03066794622705,4.30942465371778,9.31114755336232,4.28451220591882,7.98229838359097,0,0,0,0.866554859253824,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,1.08245520505607,0,0,2.16949371466214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4947081960441,3.43785736662608,0,0.232236671860439,1.03093969057675,0.80673409849337,1.33426826306922,3.42406127002606,7.59246498471219,2.47048432086016,4.77536896720512,2.38747766449381,3.11942539390592,7.19055526923377,10.1584883441106,11.1519113022446,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.203319467126849,1.08005340821801,1.25452977608681,2.18362563746178,2.02296519577231,1.57041565878138,5.49687478166462,5.05498395837992,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.830445126869219,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000098713 | |||
}} |
Revision as of 23:20, 3 August 2015
Short description: | p1@ENSMUST00000098713 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000098713_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -86bp_to_ENSMUST00000098713_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.58e-13 | 6 |
gut absorptive cell | 5.58e-13 | 6 |
enterocyte | 5.58e-13 | 6 |
columnar/cuboidal epithelial cell | 5.10e-11 | 7 |
intestinal epithelial cell | 2.11e-08 | 9 |
epithelial cell of alimentary canal | 2.11e-08 | 9 |
M cell of gut | 1.42e-07 | 3 |
epithelial cell | 5.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.14e-45 | 47 |
intestine | 1.71e-40 | 31 |
mucosa | 6.14e-20 | 15 |
digestive system | 6.62e-20 | 116 |
digestive tract | 6.62e-20 | 116 |
primitive gut | 6.62e-20 | 116 |
endoderm-derived structure | 1.98e-19 | 118 |
endoderm | 1.98e-19 | 118 |
presumptive endoderm | 1.98e-19 | 118 |
subdivision of digestive tract | 1.37e-17 | 114 |
intestinal mucosa | 3.41e-16 | 13 |
wall of intestine | 3.41e-16 | 13 |
gastrointestinal system mucosa | 3.41e-16 | 13 |
organ component layer | 2.08e-11 | 24 |
small intestine | 7.87e-10 | 4 |
epithelium of mucosa | 2.11e-08 | 9 |
gastrointestinal system epithelium | 2.11e-08 | 9 |
intestinal epithelium | 2.11e-08 | 9 |
ileal mucosa | 5.61e-08 | 3 |
ileum | 5.61e-08 | 3 |
mucosa of small intestine | 5.61e-08 | 3 |
wall of small intestine | 5.61e-08 | 3 |
stomach | 4.21e-07 | 16 |
food storage organ | 4.21e-07 | 16 |
organ system subdivision | 5.14e-07 | 194 |
simple columnar epithelium | 9.71e-07 | 11 |